Pavir.Aa03436 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Aa03436 T072303_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND

HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.854 0.703
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR

YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.854 0.703
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV

BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.849 0.750
HBP1A_WHEAT
M10041_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1A_Q2
0.827 0.859
HBP1A_WHEAT
M10042_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBPA1_Q6_01
0.827 0.859
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.821 0.719
GBF1
M09913_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.821 0.719
GBF1
M09914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.821 0.719
GBF1
M09915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.821 0.719
GBF1
M09916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.821 0.719
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.817 0.641
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA

TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.817 0.641
Q40645_ORYSA
M10050_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.784 0.547
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.784 0.578
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa03436.1.p bZIP 248 311

Links

Other bZIP family TFs
Other Panicum virgatum TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G153144 Zea mays GRMZM2G153144 I 0.896
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I 0.896
GRMZM2G019106 Zea mays GRMZM2G019106 I 0.896
Sb04g002360 Sorghum bicolor Sb04g002360 I 0.896
Si017637m.g Setaria italica Si017637m.g I 0.896
OB02G12150 Oryza brachyantha OB02G12150 I 0.881
OS02G0128200 Oryza sativa OS02G0128200 I 0.881
ONIVA02G02170 Oryza nivara ONIVA02G02170 I 0.881
ORGLA02G0021500 Oryza glaberrima ORGLA02G0021500 I 0.881
BGIOSGA007448 Oryza indica BGIOSGA007448 I 0.881
GRMZM2G088140 Zea mays GRMZM2G088140 I 0.872
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I 0.870
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I 0.870
mgf008195m Mimulus guttatus mgf008195m I 0.869
mgf013375m Mimulus guttatus mgf013375m I 0.866
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.863
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.861
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.861
Ca_11455 Cicer arietinum Ca_11455 I 0.861
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.861
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.861
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.861
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.861
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.861
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.861
Cla016502 Citrullus lanatus Cla016502 I 0.861
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I 0.860
OPUNC12G06450 Oryza punctata OPUNC12G06450 I 0.860
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.860
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I 0.860
OLONG_021967 Oryza longistaminata OLONG_021967 I 0.860
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I 0.860
BGIOSGA036419 Oryza indica BGIOSGA036419 I 0.860
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I 0.860
ONIVA12G06500 Oryza nivara ONIVA12G06500 I 0.860
OMERI12G04560 Oryza meridionalis OMERI12G04560 I 0.860
OBART12G06770 Oryza barthii OBART12G06770 I 0.860
LPERR12G05920 Leersia perrieri LPERR12G05920 I 0.860
OB12G16310 Oryza brachyantha OB12G16310 I 0.860
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.860
Sb08g008300 Sorghum bicolor Sb08g008300 I 0.860
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I 0.860
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.860
GRMZM2G074373 Zea mays GRMZM2G074373 I 0.860
Si022325m.g Setaria italica Si022325m.g I 0.860
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.859
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.857
Cla008988 Citrullus lanatus Cla008988 I 0.857
Ca_15839 Cicer arietinum Ca_15839 I 0.854
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.854
BZIP68 Arabidopsis thaliana AT1G32150 D 0.854
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I 0.854
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.854
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.854
OPUNC02G01690 Oryza punctata OPUNC02G01690 I 0.853
MDP0000286846 Malus domestica MDP0000286846 I 0.849
MDP0000185553 Malus domestica MDP0000185553 I 0.849
Pm023132 Prunus mume Pm023132 I 0.849
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I 0.849
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I 0.849
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I 0.849
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.849
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.849
PK23964.1 Cannabis sativa PK23964.1 D 0.849
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I 0.849
30068.m002661 Ricinus communis 30068.m002661 I 0.849
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I 0.849
Traes_5DL_C794C1EEA Triticum aestivum Traes_5DL_C794C1EEA I 0.848
Traes_5BS_A5532B750 Triticum aestivum Traes_5BS_A5532B750 I 0.848
Traes_5AS_3A85F1C2C Triticum aestivum Traes_5AS_3A85F1C2C I 0.848
Traes_5BL_A5532B750 Triticum aestivum Traes_5BL_A5532B750 I 0.848
TRIUR3_34165 Triticum urartu TRIUR3_34165 I 0.848
MLOC_63066 Hordeum vulgare MLOC_63066 I 0.848
F775_32205 Aegilops tauschii F775_32205 I 0.848
TCM_016606 Theobroma cacao TCM_016606 I 0.847
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.846
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.845
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.842
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I 0.840
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.836
GSMUA_Achr4G11610_001 Musa acuminata GSMUA_Achr4G11610_001 I 0.835
GLYMA01G38381 Glycine max GLYMA01G38381 I 0.835
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.833
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I 0.833
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.832
mgf008605m Mimulus guttatus mgf008605m I 0.832
mgf000639m Mimulus guttatus mgf000639m I 0.829
mgf005151m Mimulus guttatus mgf005151m I 0.829
Bra011701 Brassica rapa Bra011701 I 0.829
Bo1g005460 Brassica oleracea Bo1g005460 I 0.829
mgf014804m Mimulus guttatus mgf014804m I 0.829
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.828
Bo4g038560 Brassica oleracea Bo4g038560 I 0.828
MLOC_81641 Hordeum vulgare MLOC_81641 I 0.827
TRIUR3_18117 Triticum urartu TRIUR3_18117 I 0.827
BRADI4G39630 Brachypodium distachyon BRADI4G39630 I 0.827
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I 0.827
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D 0.827
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.826
MDP0000231274 Malus domestica MDP0000231274 I 0.826
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.826
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.825
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I 0.822
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.821
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.821
GBF1 Arabidopsis thaliana AT4G36730 D 0.821
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.821
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.821
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.821
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.820
Bra010572 Brassica rapa Bra010572 I 0.820
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.820
Cla014415 Citrullus lanatus Cla014415 I 0.818
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.818
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.817
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.817
BZIP16 Arabidopsis thaliana AT2G35530 D 0.817
Bra005335 Brassica rapa Bra005335 I 0.817
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I 0.816
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.815
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.815
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.815
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.815
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.814
Pm026586 Prunus mume Pm026586 I 0.814
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.813
TCM_000436 Theobroma cacao TCM_000436 I 0.813
PDK_20s1348391g002 Phoenix dactylifera PDK_20s1348391g002 I 0.813
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.812
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I 0.812
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.811
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.811
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.811
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.811
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.810
fgeneshCV_pg.C_scaffold_12000127 Chlorella vulgaris fgeneshCV_pg.C_scaffold_12000127 I 0.809
Genemark1.5055_g Coccomyxa subellipsoidea C169 Genemark1.5055_g I 0.809
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.809
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.806
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.804
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.804
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.803
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.803
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.803
29646.m001068 Ricinus communis 29646.m001068 I 0.803
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.803
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.803
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.802
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.801
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.801
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.800
BRADI3G02730 Brachypodium distachyon BRADI3G02730 I 0.799
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.798
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.798
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.797
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.796
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I 0.794
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I 0.794
TRIUR3_31142 Triticum urartu TRIUR3_31142 I 0.794
Bo4g183320 Brassica oleracea Bo4g183320 I 0.792
Ca_01293 Cicer arietinum Ca_01293 I 0.791
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.791
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.786
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.786
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.786
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I 0.786
F775_07803 Aegilops tauschii F775_07803 I 0.786
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I 0.786
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.786
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.786
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.786
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I 0.785
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I 0.785
OB07G15280 Oryza brachyantha OB07G15280 I 0.785
OBART07G07070 Oryza barthii OBART07G07070 I 0.785
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I 0.785
LPERR07G06120 Leersia perrieri LPERR07G06120 I 0.785
GRMZM2G171370 Zea mays GRMZM2G171370 I 0.785
BGIOSGA025382 Oryza indica BGIOSGA025382 I 0.785
GRMZM2G095078 Zea mays GRMZM2G095078 I 0.785
Si030123m.g Setaria italica Si030123m.g I 0.785
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I 0.785
OPUNC07G06790 Oryza punctata OPUNC07G06790 I 0.785
OS07G0209800 Oryza sativa OS07G0209800 I 0.785
ONIVA07G05320 Oryza nivara ONIVA07G05320 I 0.785
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I 0.785
OLONG_021599 Oryza longistaminata OLONG_021599 I 0.785
OMERI07G05820 Oryza meridionalis OMERI07G05820 I 0.785
Sb02g006350 Sorghum bicolor Sb02g006350 I 0.785
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.784
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.784
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.784
GSMUA_Achr4G33130_001 Musa acuminata GSMUA_Achr4G33130_001 I 0.784
GRMZM5G848942 Zea mays GRMZM5G848942 I 0.784
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.784
OB01G34490 Oryza brachyantha OB01G34490 I 0.784
OBART05G26280 Oryza barthii OBART05G26280 I 0.784
OBART01G25300 Oryza barthii OBART01G25300 I 0.784
OB05G33790 Oryza brachyantha OB05G33790 I 0.784
GRMZM2G358701 Zea mays GRMZM2G358701 I 0.784
GRMZM2G160136 Zea mays GRMZM2G160136 I 0.784
Bo3g028300 Brassica oleracea Bo3g028300 I 0.784
BGIOSGA020389 Oryza indica BGIOSGA020389 I 0.784
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.784
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.784
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.784
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.784
GRMZM2G011932 Zea mays GRMZM2G011932 I 0.784
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.784
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.784
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.784
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.784
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.784
OS01G0658900 Oryza sativa OS01G0658900 I 0.784
OS05G0569300 Oryza sativa OS05G0569300 I 0.784
Si022388m.g Setaria italica Si022388m.g I 0.784
Si001929m.g Setaria italica Si001929m.g I 0.784
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.784
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.784
OPUNC05G23850 Oryza punctata OPUNC05G23850 I 0.784
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.784
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.784
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.784
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.784
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.784
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.784
ONIVA05G28290 Oryza nivara ONIVA05G28290 I 0.784
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.784
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.783
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.783
gw1.8.536.1 Micromonas pusilla gw1.8.536.1 I 0.783