Pavir.Ba00049 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ba00049 T072314_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TGA1B_TOBAC
M10083_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1B_01
0.797 0.641
TGA1B_TOBAC
M10084_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1B_Q2
0.797 0.641
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00049.1.p bZIP 116 179

Links

Other bZIP family TFs
Other Panicum virgatum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.000
AGL80 Arabidopsis thaliana AT5G48670 D 0.000
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.000
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I 0.000
Bo9g078450 Brassica oleracea Bo9g078450 I 0.000
Bo2g104810 Brassica oleracea Bo2g104810 I 0.000
Bra018490 Brassica rapa Bra018490 I 0.000
Bra029469 Brassica rapa Bra029469 I 0.000
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.000
Ca_13275 Cicer arietinum Ca_13275 I 0.000
Ca_06495 Cicer arietinum Ca_06495 I 0.000
Cla005226 Citrullus lanatus Cla005226 I 0.000
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.000
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.000
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.000
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.000
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.000
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.000
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.000
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.000
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.000
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.000
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.000
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.000
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.000
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.000
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.000
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.000
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.000
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.000
Lus10022316.g Linum usitatissimum Lus10022316.g I 0.000
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.000
Lus10014883.g Linum usitatissimum Lus10014883.g I 0.000
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.000
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.000
MDP0000925348 Malus domestica MDP0000925348 I 0.000
MDP0000846004 Malus domestica MDP0000846004 I 0.000
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.000
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.000
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.000
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.000
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.000
Pm004396 Prunus mume Pm004396 I 0.000
Pm003257 Prunus mume Pm003257 I 0.000
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.000
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.000
PRUPE_ppa017207mg Prunus persica PRUPE_ppa017207mg N 0.000
30128.m008984 Ricinus communis 30128.m008984 I 0.000
30199.m000879 Ricinus communis 30199.m000879 I 0.000
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.000
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.000
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.000
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.000
TCM_026842 Theobroma cacao TCM_026842 I 0.000
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.000