Pavir.Ba01782 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ba01782 T072322_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.814 0.719
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.814 0.719
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.782 0.562
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.782 0.562
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01782.1.p bZIP 79 142

Links

Other bZIP family TFs
Other Panicum virgatum TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AC186606.4_FG003 Zea mays AC186606.4_FG003 I 0.808
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.787
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.782
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.814
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.828
BGIOSGA029595 Oryza indica BGIOSGA029595 I 0.821
Bo2g012800 Brassica oleracea Bo2g012800 I 0.787
Bo9g163740 Brassica oleracea Bo9g163740 I 0.788
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.787
Bra008670 Brassica rapa Bra008670 I 0.788
Bra023540 Brassica rapa Bra023540 I 0.787
BRADI3G38840 Brachypodium distachyon BRADI3G38840 N 0.803
BRADI3G56290 Brachypodium distachyon BRADI3G56290 I 0.792
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.826
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.787
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.787
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.789
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.782
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.821
GRMZM2G137532 Zea mays GRMZM2G137532 N 0.848
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.824
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I 0.786
GSMUA_Achr6G36230_001 Musa acuminata GSMUA_Achr6G36230_001 I 0.807
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.828
LPERR09G10020 Leersia perrieri LPERR09G10020 I 0.821
MLOC_6062 Hordeum vulgare MLOC_6062 N 0.803
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.799
OB09G20300 Oryza brachyantha OB09G20300 I 0.821
OBART02G31030 Oryza barthii OBART02G31030 I 0.814
OBART08G18720 Oryza barthii OBART08G18720 I 0.828
OBART09G13750 Oryza barthii OBART09G13750 I 0.821
OBART09G13760 Oryza barthii OBART09G13760 I 0.821
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.814
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.828
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I 0.821
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.814
OLONG_013604 Oryza longistaminata OLONG_013604 I 0.821
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.814
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.828
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.814
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.828
ONIVA09G14270 Oryza nivara ONIVA09G14270 I 0.821
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.814
OPUNC08G16670 Oryza punctata OPUNC08G16670 I 0.810
OPUNC09G12140 Oryza punctata OPUNC09G12140 I 0.821
OPUNC09G12240 Oryza punctata OPUNC09G12240 I 0.821
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.789
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.814
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.828
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I 0.821
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.814
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.828
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I 0.821
OS02G0728001 Oryza sativa OS02G0728001 D 0.814
OS08G0487100 Oryza sativa OS08G0487100 I 0.828
OS09G0474000 Oryza sativa OS09G0474000 I 0.821
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.906
Pavir.Fa00602 Panicum virgatum Pavir.Fa00602 I 0.808
Pavir.Fb01824 Panicum virgatum Pavir.Fb01824 I 0.806
PDK_20s1520551g003 Phoenix dactylifera PDK_20s1520551g003 I 0.799
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.789
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.801
Sb02g027410 Sorghum bicolor Sb02g027410 I 0.876
Sb07g028900 Sorghum bicolor Sb07g028900 I 0.808
Sb07g028960 Sorghum bicolor Sb07g028960 I 0.808
Si014433m.g Setaria italica Si014433m.g I 0.804
Si019897m.g Setaria italica Si019897m.g I 0.814
Si031238m.g Setaria italica Si031238m.g I 0.893
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.789
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.787
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I 0.819
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I 0.819
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.799
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.799