Pavir.Ca00403 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ca00403 T072344_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV

BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.870 0.812
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND

HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.864 0.734
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR

YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.864 0.734
HBP1A_WHEAT
M10041_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1A_Q2
0.837 0.781
HBP1A_WHEAT
M10042_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBPA1_Q6_01
0.837 0.781
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.832 0.688
GBF1
M09913_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.832 0.688
GBF1
M09914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.832 0.688
GBF1
M09915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.832 0.688
GBF1
M09916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.832 0.688
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.827 0.688
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA

TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.827 0.688
Q40645_ORYSA
M10050_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.793 0.578
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.793 0.594
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN

NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.789 0.562
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.787 0.594
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.787 0.594
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN

NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.783 0.594
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00403.1.p bZIP 288 351

Links

Other bZIP family TFs
Other Panicum virgatum TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRIVIDRAFT_30358 Trichoderma virens TRIVIDRAFT_30358 I 0.000
BBA_00886 Beauveria bassiana BBA_00886 N 0.000
NechaG49678 Fusarium solani NechaG49678 N 0.000
PFICI_14032 Pestalotiopsis fici PFICI_14032 N 0.000
S40285_07528 Stachybotrys chlorohalonata S40285_07528 N 0.000
S40288_02302 Stachybotrys chartarum S40288_02302 N 0.000
SAPIO_CDS9353 Scedosporium apiospermum SAPIO_CDS9353 N 0.000
TRIATDRAFT_214226 Trichoderma atroviride TRIATDRAFT_214226 N 0.000
TRIREDRAFT_53067 Trichoderma reesei TRIREDRAFT_53067 N 0.000
UV8b_2110 Ustilaginoidea virens UV8b_2110 N 0.000
X797_002485 Metarhizium robertsii X797_002485 N 0.000
MGU_09467 Metarhizium guizhouense MGU_09467 N 0.000
MANI_022807 Metarhizium anisopliae MANI_022807 N 0.000
CCM_02835 Cordyceps militaris CCM_02835 N 0.000
FFUJ_03786 Fusarium fujikuroi FFUJ_03786 N 0.000
FGRRES_16424 Fusarium graminearum FGRRES_16424 N 0.000
FOXG_05661 Fusarium oxysporum FOXG_05661 N 0.000
FPSE_04048 Fusarium pseudograminearum FPSE_04048 N 0.000
FVEG_03514 Fusarium verticillioides FVEG_03514 N 0.000
GLRG_11832 Colletotrichum graminicola GLRG_11832 N 0.000
MAC_05468 Metarhizium acridum MAC_05468 N 0.000
MAJ_05893 Metarhizium majus MAJ_05893 N 0.000
MAM_07435 Metarhizium album MAM_07435 N 0.000
e_gw1.43.159.1 Nectria haematococca e_gw1.43.159.1 N 0.000