Pavir.Ca00968 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ca00968 T072346_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q40645_ORYSA
M10050_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.865 0.812
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.864 0.812
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN

NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.854 0.750
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN

NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.848 0.703
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD

HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.836 0.734
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD

HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.836 0.734
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.836 0.734
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.821 0.766
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.821 0.766
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.811 0.656
GBF1
M09913_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.811 0.656
GBF1
M09914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.811 0.656
GBF1
M09915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.811 0.656
GBF1
M09916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.811 0.656
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND

HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.789 0.641
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR

YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.789 0.641
CPRF1_PETCR
M10066_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
0.786 0.688
CPRF1_PETCR
M10067_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
0.786 0.688
CPRF1_PETCR
M10068_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
0.786 0.688
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.783 0.625
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA

TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.783 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00968.1.p bZIP 457 520
Pavir.Ca00968.2.p bZIP 454 517

Links

Other bZIP family TFs
Other Panicum virgatum TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB004300 Anopheles albimanus AALB004300 I 0.000
AARA000887 Anopheles arabiensis AARA000887 I 0.000
AATE006511 Anopheles atroparvus AATE006511 I 0.000
ACOM039838 Anopheles coluzzii ACOM039838 I 0.000
ACUA004794 Anopheles culicifacies ACUA004794 I 0.000
ADAC004162 Anopheles darlingi ADAC004162 I 0.000
ADIR007438 Anopheles dirus ADIR007438 I 0.000
AEPI005427 Anopheles epiroticus AEPI005427 I 0.000
AFAF017409 Anopheles farauti AFAF017409 I 0.000
AFUN000141 Anopheles funestus AFUN000141 I 0.000
AMEM018156 Anopheles merus AMEM018156 I 0.000
AMIN007990 Anopheles minimus AMIN007990 I 0.000
AQUA000938 Anopheles quadriannulatus AQUA000938 I 0.000
ASIS001542 Anopheles sinensis ASIS001542 I 0.000
ASTEI09431 Anopheles stephensi ASTEI09431 I 0.000
CGI_10003797 Crassostrea gigas CGI_10003797 N 0.000
CGI_10008414 Crassostrea gigas CGI_10008414 I 0.000
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I 0.000
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I 0.000
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I 0.000
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I 0.000
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I 0.000
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I 0.000
e_gw.24.282.1 Branchiostoma floridae e_gw.24.282.1 I 0.000
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I 0.000
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I 0.000
GA28498 Drosophila pseudoobscura FBgn0249858 I 0.000
GD13032 Drosophila simulans FBgn0184754 I 0.000
GE20386 Drosophila yakuba FBgn0237702 I 0.000
GF24150 Drosophila ananassae FBgn0101144 I 0.000
GG14935 Drosophila erecta FBgn0107189 I 0.000
GH23565 Drosophila grimshawi FBgn0131022 I 0.000
GI12193 Drosophila mojavensis FBgn0134950 I 0.000
GJ11425 Drosophila virilis FBgn0198683 I 0.000
GK10510 Drosophila willistoni FBgn0212525 I 0.000
GL17823 Drosophila persimilis FBgn0155426 I 0.000
GM24985 Drosophila sechellia FBgn0179846 I 0.000
hlfa Oryzias latipes ENSORLG00000000969 I 0.000
ISCW004978 Ixodes scapularis ISCW004978 I 0.000
LCUP014933 Lucilia cuprina LCUP014933 I 0.000
LLOJ006612 Lutzomyia longipalpis LLOJ006612 I 0.000
MDOA003519 Musca domestica MDOA003519 I 0.000
Ogr00037 Ophisaurus gracilis Ogr00037 I 0.000
PDP1 Aedes aegypti AAEL005255 I 0.000
PDP1 Anopheles gambiae AGAP006376 I 0.000
PDP1 Culex quinquefasciatus CPIJ014920 I 0.000
Pdp1 Drosophila melanogaster FBgn0016694 D 0.000
PPAI002842 Phlebotomus papatasi PPAI002842 I 0.000
SMAR002779 Strigamia maritima SMAR002779 I 0.000
TEF Canis familiaris ENSCAFG00000001095 I 0.000
Tef Rattus norvegicus ENSRNOG00000019383 I 0.000
tef/hlf Ciona intestinalis ENSCING00000002295 N 0.000
tefa Danio rerio ENSDARG00000039117 I 0.000
tefb Danio rerio ENSDARG00000098103 I 0.000
tefb Gasterosteus aculeatus ENSGACG00000007628 I 0.000
tefb Takifugu rubripes ENSTRUG00000003565 I 0.000