Pavir.Db00496 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Db00496 T072364_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0266800
M10046_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.832 0.766
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN

NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.808 0.609
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db00496.1.p bZIP 114 197
Pavir.Db00496.2.p bZIP 114 195
Pavir.Db00496.3.p bZIP 114 177

Links

Other bZIP family TFs
Other Panicum virgatum TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29598.m000468 Ricinus communis 29598.m000468 I 0.790
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.807
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.789
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.832
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.832
BGIOSGA020738 Oryza indica BGIOSGA020738 I 0.861
BGIOSGA020743 Oryza indica BGIOSGA020743 I 0.861
Bra000102 Brassica rapa Bra000102 I 0.797
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.794
Ca_03753 Cicer arietinum Ca_03753 I 0.808
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.785
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.801
Cla015037 Citrullus lanatus Cla015037 I 0.797
Cla020112 Citrullus lanatus Cla020112 I 0.794
Cla022576 Citrullus lanatus Cla022576 I 0.782
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.794
Cucsa.161540 Cucumis sativus Cucsa.161540 I 0.782
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.790
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.797
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I 0.797
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.793
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.793
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.793
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.808
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I 0.791
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.832
GRMZM2G103647 Zea mays GRMZM2G103647 I 0.877
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.806
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.793
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.782
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.832
LPERR06G19690 Leersia perrieri LPERR06G19690 I 0.851
MDP0000176747 Malus domestica MDP0000176747 I 0.786
mgf007535m Mimulus guttatus mgf007535m I 0.792
mgf009803m Mimulus guttatus mgf009803m I 0.790
mgf012838m Mimulus guttatus mgf012838m I 0.803
mgf013074m Mimulus guttatus mgf013074m I 0.792
OB06G31430 Oryza brachyantha OB06G31430 I 0.851
OBART02G05680 Oryza barthii OBART02G05680 I 0.832
OBART02G11580 Oryza barthii OBART02G11580 I 0.832
OBART06G23730 Oryza barthii OBART06G23730 I 0.814
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.832
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.832
OGLUM06G24950 Oryza glumaepatula OGLUM06G24950 I 0.819
OLONG_021042 Oryza longistaminata OLONG_021042 I 0.814
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.832
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.832
OMERI06G23650 Oryza meridionalis OMERI06G23650 I 0.861
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.832
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.832
ONIVA06G27820 Oryza nivara ONIVA06G27820 I 0.861
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.832
OPUNC06G21410 Oryza punctata OPUNC06G21410 I 0.861
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.793
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.801
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.832
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.832
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I 0.861
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.832
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.832
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I 0.861
OS02G0175100 Oryza sativa OS02G0175100 I 0.832
OS02G0266800 Oryza sativa OS02G0266800 D 0.832
OS06G0662200 Oryza sativa OS06G0662200 I 0.861
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.832
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.832
Pavir.Da00268 Panicum virgatum Pavir.Da00268 N 0.813
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.813
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.793
PK05128.1 Cannabis sativa PK05128.1 D 0.808
PK09738.1 Cannabis sativa PK09738.1 I 0.790
PK11472.1 Cannabis sativa PK11472.1 I 0.811
Pm005087 Prunus mume Pm005087 I 0.812
Pm020231 Prunus mume Pm020231 I 0.813
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.793
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.813
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I 0.812
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I 0.790
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.793
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.793
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.832
Sb10g026450 Sorghum bicolor Sb10g026450 I 0.877
Si007043m.g Setaria italica Si007043m.g I 0.877
Si017778m.g Setaria italica Si017778m.g I 0.832
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.793
TCM_026349 Theobroma cacao TCM_026349 I 0.793
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.793