CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Db00825
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.Db00825
T072366_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Db00825.1.p
bZIP
142
204
VSKKKKMRKMRNRDSAMKSRERKKTYIKDLETKSKYLEAECRRLSYALQCYAAENMALRQSLL
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si006978m.g
Setaria italica
Si006978m.g
N
0.815
BRADI1G35790
Brachypodium distachyon
BRADI1G35790
N
0.807
Si017847m.g
Setaria italica
Si017847m.g
N
0.803
GRMZM2G025812
Zea mays
GRMZM2G025812
N
0.801
Sb10g024430
Sorghum bicolor
Sb10g024430
N
0.801
Pavir.Da00593
Panicum virgatum
Pavir.Da00593
N
0.798
BZIP50
Oryza sativa
OS06G0622700
N
0.790
ORUFI06G22890
Oryza rufipogon
ORUFI06G22890
N
0.790
ONIVA06G25200
Oryza nivara
ONIVA06G25200
N
0.790
OBART06G21250
Oryza barthii
OBART06G21250
N
0.790
OGLUM06G22450
Oryza glumaepatula
OGLUM06G22450
N
0.790
OMERI01G31300
Oryza meridionalis
OMERI01G31300
N
0.790
OPUNC06G19380
Oryza punctata
OPUNC06G19380
N
0.790
BGIOSGA023284
Oryza indica
BGIOSGA023284
N
0.790
OB06G29280
Oryza brachyantha
OB06G29280
N
0.788