Pavir.Ea03718 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ea03718 T072376_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.782 0.688
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03718.1.p bZIP 187 251
Pavir.Ea03718.2.p bZIP 187 238

Links

Other bZIP family TFs
Other Panicum virgatum TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.871
Si003247m.g Setaria italica Si003247m.g I 0.871
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.871
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.856
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.823
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.823
Si006889m.g Setaria italica Si006889m.g I 0.823
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N 0.818
GBF4 Arabidopsis thaliana AT1G03970 N 0.818
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.816
MLOC_53321 Hordeum vulgare MLOC_53321 I 0.815
TRIUR3_19588 Triticum urartu TRIUR3_19588 I 0.815
F775_25077 Aegilops tauschii F775_25077 I 0.815
BRADI2G24120 Brachypodium distachyon BRADI2G24120 I 0.815
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.815
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.813
TCM_035623 Theobroma cacao TCM_035623 N 0.813
BZIP46 Oryza sativa OS06G0211200 I 0.813
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.813
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.813
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.813
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I 0.813
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.813
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.813
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.812
OBART05G17920 Oryza barthii OBART05G17920 I 0.812
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.810
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.810
Ca_04375 Cicer arietinum Ca_04375 N 0.809
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.808
mgf008848m Mimulus guttatus mgf008848m N 0.807
Sb09g021580 Sorghum bicolor Sb09g021580 I 0.806
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.805
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I 0.803
ONIVA05G18780 Oryza nivara ONIVA05G18780 I 0.803
OS05G0437700 Oryza sativa OS05G0437700 I 0.803
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.803
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I 0.803
OB05G25740 Oryza brachyantha OB05G25740 I 0.803
OMERI05G15500 Oryza meridionalis OMERI05G15500 I 0.803
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I 0.803
LPERR05G14180 Leersia perrieri LPERR05G14180 I 0.803
BGIOSGA019930 Oryza indica BGIOSGA019930 I 0.803
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D 0.803
PK16522.1 Cannabis sativa PK16522.1 N 0.801
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I 0.801
ORUFI01G41890 Oryza rufipogon ORUFI01G41890 I 0.800
OBART01G38510 Oryza barthii OBART01G38510 I 0.800
OS01G0867300 Oryza sativa OS01G0867300 I 0.800
ORGLA01G0323500 Oryza glaberrima ORGLA01G0323500 I 0.800
OPUNC01G37310 Oryza punctata OPUNC01G37310 I 0.800
OGLUM01G42750 Oryza glumaepatula OGLUM01G42750 I 0.800
ONIVA01G43200 Oryza nivara ONIVA01G43200 I 0.800
OLONG_006755 Oryza longistaminata OLONG_006755 I 0.800
OMERI01G35430 Oryza meridionalis OMERI01G35430 I 0.800
OPUNC05G15820 Oryza punctata OPUNC05G15820 I 0.799
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.798
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I 0.798
LPERR01G33060 Leersia perrieri LPERR01G33060 I 0.796
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.795
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.795
Bo7g067030 Brassica oleracea Bo7g067030 N 0.795
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.795
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.795
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.795
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.795
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.794
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N 0.793
Bo5g004230 Brassica oleracea Bo5g004230 N 0.793
Bra015281 Brassica rapa Bra015281 N 0.793
GRMZM2G438293 Zea mays GRMZM2G438293 N 0.792
GRMZM2G129247 Zea mays GRMZM2G129247 N 0.792
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N 0.791
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N 0.791
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.791
BGIOSGA000430 Oryza indica BGIOSGA000430 I 0.790
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.788
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.788
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N 0.787
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.787
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.786
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.786
Traes_7DS_C6A3C10A6 Triticum aestivum Traes_7DS_C6A3C10A6 N 0.785
MLOC_20326 Hordeum vulgare MLOC_20326 N 0.785
TRIUR3_23754 Triticum urartu TRIUR3_23754 N 0.785
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.784
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N 0.782