CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea03718
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.Ea03718
T072376_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LOC_Os05g36160
M01825_2.00
Oryza sativa
MCACGTGK
MCACGTGK
PBM
Weirauch et al.(2014)
pTH8599
0.782
0.688
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea03718.1.p
bZIP
187
251
RAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAELLREQEERHQKRLKELLERVT
Pavir.Ea03718.2.p
bZIP
187
238
RAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAELLREQVIL
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy