CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ia03469
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.Ia03469
T072420_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia03469.1.p
bZIP
43
92
MDQKVLRRLAQNREAARKSRLRKKAFVQQLESSKLKLASLEQELQKARQQ
Pavir.Ia03469.2.p
bZIP
43
92
MDQKVLRRLAQNREAARKSRLRKKAFVQQLESSKLKLASLEQELQKARQQ
Pavir.Ia03469.3.p
bZIP
43
92
MDQKVLRRLAQNREAARKSRLRKKAFVQQLESSKLKLASLEQELQKARQQ
Pavir.Ia03469.4.p
bZIP
43
92
MDQKVLRRLAQNREAARKSRLRKKAFVQQLESSKLKLASLEQELQKARQQ
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si036527m.g
Setaria italica
Si036527m.g
N
0.788
Traes_4AS_6EDD5ACF7
Triticum aestivum
Traes_4AS_6EDD5ACF7
N
0.788
Traes_4BL_DAFEC95DD
Triticum aestivum
Traes_4BL_DAFEC95DD
N
0.788
Traes_4DL_73DC40D7B
Triticum aestivum
Traes_4DL_73DC40D7B
N
0.788
Sb01g037050
Sorghum bicolor
Sb01g037050
N
0.788
BRADI1G64060
Brachypodium distachyon
BRADI1G64060
N
0.788
GRMZM2G056099
Zea mays
GRMZM2G056099
N
0.788
GRMZM2G174284
Zea mays
GRMZM2G174284
N
0.788
MLOC_64008
Hordeum vulgare
MLOC_64008
N
0.788
Pavir.J20659
Panicum virgatum
Pavir.J20659
N
0.785
Si006667m.g
Setaria italica
Si006667m.g
N
0.785
BRADI1G43900
Brachypodium distachyon
BRADI1G43900
N
0.785
Pavir.Da01921
Panicum virgatum
Pavir.Da01921
N
0.785