CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J01346
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.J01346
T072436_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J01346.1.p
bZIP
87
114
GDDRRSIRMMRNRESALRSRARKRASRD
Pavir.J01346.1.p
bZIP
126
165
MAYVENLEKEVRRLVDENLKLKKQCKELKLEVAALVLPTK
Pavir.J01346.2.p
bZIP
87
149
GDDRRSIRMMRNRESALRSRARKRAYVENLEKEVRRLVDENLKLKKQCKELKLEVAALVLPTK
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP22224
Atta cephalotes
ACEP22224
N
0.000
ACYPI002526
Acyrthosiphon pisum
ACYPI002526
N
0.000
BGIBMGA012021
Bombyx mori
BGIBMGA012021
N
0.000
CLEC004526
Cimex lectularius
CLEC004526
N
0.000
GB54030
Apis mellifera
GB54030
N
0.000
HHAL001749-PA
Halyomorpha halys
HHAL001749-PA
N
0.000
HMEL016330
Heliconius melpomene
HMEL016330
N
0.000
LDEC016603
Leptinotarsa decemlineata
LDEC016603
N
0.000
SINV19129
Solenopsis invicta
SINV19129
N
0.000
TC003891
Tribolium castaneum
TC003891
N
0.000
YQE_10224
Dendroctonus ponderosae
YQE_10224
N
0.000