Pavir.J05659 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J05659 T072451_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.789 0.816
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05659.1.p bZIP 185 249
Pavir.J05659.2.p bZIP 185 233

Links

Other bZIP family TFs
Other Panicum virgatum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.856
Si003247m.g Setaria italica Si003247m.g I 0.856
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.856
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.856
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.815
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.815
Si006889m.g Setaria italica Si006889m.g I 0.815
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.805
BZIP46 Oryza sativa OS06G0211200 I 0.805
GBF4 Arabidopsis thaliana AT1G03970 N 0.803
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N 0.803
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.801
TRIUR3_19588 Triticum urartu TRIUR3_19588 I 0.800
F775_25077 Aegilops tauschii F775_25077 I 0.800
MLOC_53321 Hordeum vulgare MLOC_53321 I 0.800
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.800
BRADI2G24120 Brachypodium distachyon BRADI2G24120 I 0.800
TCM_035623 Theobroma cacao TCM_035623 N 0.798
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.798
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.798
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.798
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.798
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.797
OBART05G17920 Oryza barthii OBART05G17920 I 0.797
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.797
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.797
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.797
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I 0.797
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N 0.796
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N 0.796
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.795
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.795
Ca_04375 Cicer arietinum Ca_04375 N 0.794
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.793
GRMZM2G129247 Zea mays GRMZM2G129247 N 0.792
mgf008848m Mimulus guttatus mgf008848m N 0.792
Sb09g021580 Sorghum bicolor Sb09g021580 I 0.791
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.790
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.790
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I 0.789
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I 0.789
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.789
OS05G0437700 Oryza sativa OS05G0437700 I 0.789
OB05G25740 Oryza brachyantha OB05G25740 I 0.789
LPERR05G14180 Leersia perrieri LPERR05G14180 I 0.789
BGIOSGA019930 Oryza indica BGIOSGA019930 I 0.789
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D 0.789
ONIVA05G18780 Oryza nivara ONIVA05G18780 I 0.789
OMERI05G15500 Oryza meridionalis OMERI05G15500 I 0.789
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I 0.789
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.788
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I 0.788
PK16522.1 Cannabis sativa PK16522.1 N 0.786
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I 0.785
OS01G0867300 Oryza sativa OS01G0867300 I 0.785
OBART01G38510 Oryza barthii OBART01G38510 I 0.785
ORUFI01G41890 Oryza rufipogon ORUFI01G41890 I 0.785
OGLUM01G42750 Oryza glumaepatula OGLUM01G42750 I 0.785
ONIVA01G43200 Oryza nivara ONIVA01G43200 I 0.785
OPUNC05G15820 Oryza punctata OPUNC05G15820 I 0.785
OMERI01G35430 Oryza meridionalis OMERI01G35430 I 0.785
OLONG_006755 Oryza longistaminata OLONG_006755 I 0.785
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.785
OPUNC01G37310 Oryza punctata OPUNC01G37310 I 0.785
ORGLA01G0323500 Oryza glaberrima ORGLA01G0323500 I 0.785
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.783