Pavir.J31353 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J31353 T072486_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.799 0.880
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.790 0.840
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.790 0.840
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J31353.1.p bZIP 258 307

Links

Other bZIP family TFs
Other Panicum virgatum TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.815
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.815
Si006889m.g Setaria italica Si006889m.g I 0.815
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.815
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.815
OBART06G07070 Oryza barthii OBART06G07070 I 0.815
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.815
OB06G16510 Oryza brachyantha OB06G16510 I 0.815
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.815
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.815
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.815
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.815
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.815
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.815
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.814
BZIP46 Oryza sativa OS06G0211200 I 0.814
OS08G0471950 Oryza sativa OS08G0471950 D 0.799
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.798
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.797
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.797
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.797
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.797
OB08G24950 Oryza brachyantha OB08G24950 I 0.797
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.797
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.797
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.797
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.797
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.797
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.797
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.797
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.797
OBART08G17810 Oryza barthii OBART08G17810 I 0.797
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.797
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.796
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.795
Bra011485 Brassica rapa Bra011485 I 0.795
Bo1g007700 Brassica oleracea Bo1g007700 I 0.795
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.792
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.792
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.792
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.790
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.790
MDP0000296303 Malus domestica MDP0000296303 I 0.790
MDP0000701734 Malus domestica MDP0000701734 I 0.790
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.790
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.790
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.790
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.790
Pm005288 Prunus mume Pm005288 I 0.790
30170.m013868 Ricinus communis 30170.m013868 I 0.790
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.790
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.790
Cla022926 Citrullus lanatus Cla022926 I 0.790
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.790
Bo6g006970 Brassica oleracea Bo6g006970 I 0.790
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.790
ABF2 Arabidopsis thaliana AT1G45249 D 0.790
Bra040260 Brassica rapa Bra040260 I 0.790
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.789
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.789
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.789
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.789
TCM_033824 Theobroma cacao TCM_033824 I 0.789
mgf020824m Mimulus guttatus mgf020824m I 0.789
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.789
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.789
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.789
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.789
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.789
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.789
Ca_01548 Cicer arietinum Ca_01548 I 0.788
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.788
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.788
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.787
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.787
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.787
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.787
PK02169.1 Cannabis sativa PK02169.1 I 0.787
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.787
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.786
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.786
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.786
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.786
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.786
BZIP23 Oryza sativa OS02G0766700 I 0.786
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.786
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.786
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.786
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.786
OBART02G33770 Oryza barthii OBART02G33770 I 0.786
OB02G40680 Oryza brachyantha OB02G40680 I 0.786
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.785
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.785
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.785
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.785
OS09G0456200 Oryza sativa OS09G0456200 I 0.785
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.785
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.785
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.785
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.785
Pm021430 Prunus mume Pm021430 I 0.785
MDP0000248567 Malus domestica MDP0000248567 I 0.784
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.784
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.784
Si017618m.g Setaria italica Si017618m.g I 0.784
TCM_007074 Theobroma cacao TCM_007074 I 0.784
mgf007524m Mimulus guttatus mgf007524m I 0.784
mgf014602m Mimulus guttatus mgf014602m I 0.784
mgf002047m Mimulus guttatus mgf002047m I 0.784
Cla016272 Citrullus lanatus Cla016272 I 0.784
TRIUR3_27679 Triticum urartu TRIUR3_27679 N 0.783
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.783
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.783
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.783
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.782
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.782
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.782
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.782
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.782
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.782
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.782
Bo7g116570 Brassica oleracea Bo7g116570 I 0.782
29801.m003176 Ricinus communis 29801.m003176 I 0.782