CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0643s0160
(
Salix purpurea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
SapurV1A.0643s0160
T072581_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT
ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.815
0.649
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.862
0.806
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.862
0.806
ABF3
M09912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.815
0.649
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN
NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.807
0.800
ABF4
M09911_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.862
0.806
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.804
0.860
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.805
0.877
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.826
0.694
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.805
0.877
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.826
0.694
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.826
0.694
ABF1
M09906_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.826
0.694
ABF1
M09907_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.826
0.694
ABF1
M09908_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.826
0.694
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0643s0160.1.p
bZIP
342
403
VERRQRRMIKNRESAARSRARKQAYTLELEDEVAKLKELNTELQKKQAEIFEMQKNQLLETM
SapurV1A.0643s0160.2.p
bZIP
342
391
VERRQRRMIKNRESAARSRARKQAYTLELEDEVAKLKELNTELQKKQVRS
SapurV1A.0643s0160.3.p
bZIP
342
391
VERRQRRMIKNRESAARSRARKQAYTLELEDEVAKLKELNTELQKKQVRS
SapurV1A.0643s0160.4.p
bZIP
342
398
VERRQRRMIKNRESAARSRARKQAYTLELEDEVAKLKELNTELQKKQAEIFEMQKNQ
SapurV1A.0643s0160.5.p
bZIP
342
369
VERRQRRMIKNRESAARSRARKQYRSSL
SapurV1A.0643s0160.6.p
bZIP
342
369
VERRQRRMIKNRESAARSRARKQVSIVT
SapurV1A.0643s0160.7.p
bZIP
342
369
VERRQRRMIKNRESAARSRARKQVSIVT
SapurV1A.0643s0160.8.p
bZIP
342
369
VERRQRRMIKNRESAARSRARKQVSIVT
Links
Other
bZIP
family TFs
Other
Salix purpurea
TFs
244 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy