CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK00315.1
(
Cannabis sativa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
PK00315.1
T072859_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.846
0.968
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.832
0.903
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.832
0.903
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.831
0.935
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.831
0.935
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.831
0.935
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01153_2.00
bZIP
167
228
DPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSGENT
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK00315.1
bZIP
167
228
DPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSGENT
Links
Other
bZIP
family TFs
Other
Cannabis sativa
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA001729
Oryza indica
BGIOSGA001729
N
0.000
BGIOSGA031986
Oryza indica
BGIOSGA031986
N
0.000
BGIOSGA031988
Oryza indica
BGIOSGA031988
N
0.000
LPERR10G06290
Leersia perrieri
LPERR10G06290
N
0.000
MDP0000722092
Malus domestica
MDP0000722092
N
0.000
OB10G16930
Oryza brachyantha
OB10G16930
N
0.000
OBART01G14190
Oryza barthii
OBART01G14190
N
0.000
OBART10G08890
Oryza barthii
OBART10G08890
N
0.000
OBART10G08900
Oryza barthii
OBART10G08900
N
0.000
OBART10G09210
Oryza barthii
OBART10G09210
N
0.000
OGLUM01G15940
Oryza glumaepatula
OGLUM01G15940
N
0.000
OGLUM10G08700
Oryza glumaepatula
OGLUM10G08700
N
0.000
OGLUM10G08720
Oryza glumaepatula
OGLUM10G08720
N
0.000
OGLUM10G08930
Oryza glumaepatula
OGLUM10G08930
N
0.000
OGLUM10G09010
Oryza glumaepatula
OGLUM10G09010
N
0.000
OLONG_010753
Oryza longistaminata
OLONG_010753
N
0.000
OMERI01G12940
Oryza meridionalis
OMERI01G12940
N
0.000
OMERI10G06110
Oryza meridionalis
OMERI10G06110
N
0.000
OMERI10G06470
Oryza meridionalis
OMERI10G06470
N
0.000
ONIVA01G16940
Oryza nivara
ONIVA01G16940
N
0.000
ONIVA10G08520
Oryza nivara
ONIVA10G08520
N
0.000
OPUNC10G07690
Oryza punctata
OPUNC10G07690
N
0.000
ORUFI01G15770
Oryza rufipogon
ORUFI01G15770
N
0.000
ORUFI10G09580
Oryza rufipogon
ORUFI10G09580
N
0.000