xbp1 (Xenopus tropicalis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-487124 T073056_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
XBP1
M02825_2.00
Homo sapiens
GVTGACGTCABB

VVTGACGTCABC
SELEX
Jolma et al.(2013)
XBP1_1
0.857 0.891
XBP1
M02826_2.00
Homo sapiens
GVTGACGTGKCVHW

WDBGMCACGTCABC
SELEX
Jolma et al.(2013)
XBP1_2
0.857 0.891
XBP1
M02730_2.00
Homo sapiens
GACGTGKCNNW

WNNGMCACGTC
SELEX
Jolma et al.(2010)
XBP1_monomer
0.857 0.891
XBP1
M04231_2.00
Homo sapiens
NVTGACGTGKNN

NNMCACGTCABN
SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1
0.857 0.891
XBP1
M04232_2.00
Homo sapiens
NVTKACGTMABV

BVTKACGTMABN
SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2
0.857 0.891
XBP1
M04010_2.00
Homo sapiens
GRTGACGTGKCV

BGMCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1
0.857 0.891
XBP1
M04011_2.00
Homo sapiens
GRTGACGTCAYS

SRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2
0.857 0.891
XBP1
M04012_2.00
Homo sapiens
KGMCACGTGKMCH

DGKMCACGTGKCM
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3
0.857 0.891
XBP1
M09932_2.00
Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB

VDHHWDNDMCACGTCABYDHWNDN
Transfac
Matys et al.(2006)
V$HTF_01
0.857 0.891
XBP1
M09933_2.00
Homo sapiens
DBRHTKACGTGKHNHWD

HWDNDMCACGTMADYVH
Transfac
Matys et al.(2006)
V$XBP1_01
0.857 0.891
XBP1
M04233_2.00
Homo sapiens
BKMCACRTCAYS

SRTGAYGTGKMV
SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1
0.857 0.891
XBP1
M04234_2.00
Homo sapiens
VVTGWCRTCAYS

SRTGAYGWCABB
SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2
0.857 0.891
Xbp1
M00757_2.00
Mus musculus
NNHBAYDNNN

NNNHRTVDNN
PBM
Weirauch et al.(2013)
pTH2852
0.857 0.875
Xbp1
M01802_2.00
Mus musculus
NHNACGYNN

NNRCGTNDN
PBM
Weirauch et al.(2014)
pTH5019
0.857 0.875
Xbp1
M08818_2.00
Mus musculus
GACGTGKCMHWD

HWDKGMCACGTC
Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C
0.857 0.875
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH67321 bZIP 55 118

Links

Other bZIP family TFs
Other Xenopus tropicalis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
xbp1.L Xenopus laevis XB-GENE-487128 I 0.872
ENSAMXG00000004136 Astyanax mexicanus ENSAMXG00000004136 I 0.863
xbp1 Gasterosteus aculeatus ENSGACG00000014266 I 0.863
ENSONIG00000010547 Oreochromis niloticus ENSONIG00000010547 I 0.862
ENSPFOG00000014555 Poecilia formosa ENSPFOG00000014555 I 0.862
ENSXMAG00000002665 Xiphophorus maculatus ENSXMAG00000002665 I 0.862
XBP1 Loxodonta africana ENSLAFG00000029029 I 0.862
xbp1 Takifugu rubripes ENSTRUG00000016185 I 0.862
XBP1 Tetraodon nigroviridis ENSTNIG00000015621 I 0.862
AAI60967 Xenopus tropicalis AAI60967 I 0.861
xbp1 Danio rerio ENSDARG00000035622 I 0.861
ENSMPUG00000013524 Mustela putorius furo ENSMPUG00000013524 I 0.857
ENSOPRG00000013983 Ochotona princeps ENSOPRG00000013983 I 0.857
Xbp1 Mus musculus ENSMUSG00000020484 D 0.857
ENSNLEG00000002404 Nomascus leucogenys ENSNLEG00000002404 I 0.857
ENSOARG00000002962 Ovis aries ENSOARG00000002962 I 0.857
XBP1 Pan troglodytes ENSPTRG00000014210 I 0.857
Xbp1 Rattus norvegicus ENSRNOG00000010298 I 0.857
XBP1 Sorex araneus ENSSARG00000002418 I 0.857
ENSPVAG00000004528 Pteropus vampyrus ENSPVAG00000004528 I 0.857
XBP1 Macaca mulatta ENSMMUG00000007215 I 0.857
ENSPPYG00000011678 Pongo abelii ENSPPYG00000011678 I 0.857
ENSPANG00000000372 Papio anubis ENSPANG00000000372 I 0.857
ENSMLUG00000001735 Myotis lucifugus ENSMLUG00000001735 I 0.857
ENSCSAG00000009947 Chlorocebus sabaeus ENSCSAG00000009947 I 0.857
XBP1 Equus caballus ENSECAG00000014780 I 0.857
XBP1 Cavia porcellus ENSCPOG00000007796 I 0.857
ENSCAFG00000011954 Canis familiaris ENSCAFG00000011954 I 0.857
XBP1 Bos taurus ENSBTAG00000005970 I 0.857
XBP1 Gorilla gorilla ENSGGOG00000007154 I 0.857
XBP1 Homo sapiens ENSG00000100219 D 0.857
XBP1 Microcebus murinus ENSMICG00000004235 I 0.857
ENSTSYG00000000515 Tarsius syrichta ENSTSYG00000000515 I 0.849
ENSLOCG00000003156 Lepisosteus oculatus ENSLOCG00000003156 I 0.848
Aan_R010399 Calypte anna Aan_R010399 I 0.848
XBP1 Taeniopygia guttata ENSTGUG00000007938 I 0.848
ENSFALG00000008312 Ficedula albicollis ENSFALG00000008312 I 0.848
ENSSHAG00000010795 Sarcophilus harrisii ENSSHAG00000010795 I 0.847
ENSGMOG00000000538 Gadus morhua ENSGMOG00000000538 I 0.847
ENSMODG00000023331 Monodelphis domestica ENSMODG00000023331 I 0.833
XBP1 Gallus gallus ENSGALG00000005796 I 0.832
ENSTBEG00000000324 Tupaia belangeri ENSTBEG00000000324 I 0.829
NEMVEDRAFT_v1g211292 Nematostella vectensis NEMVEDRAFT_v1g211292 I 0.822
Myotis_brandtii_XBP1_10027497 Myotis brandtii Myotis_brandtii_XBP1_10027497 I 0.815
ENSP00000343155-D2 Bos grunniens ENSP00000343155-D2 I 0.815
ENSMMUP00000009460 Macaca fascicularis ENSMMUP00000009460 I 0.815
XBP1 Ornithorhynchus anatinus ENSOANG00000008817 I 0.815
ENSFCAG00000028366 Felis catus ENSFCAG00000028366 I 0.815
ENSDNOG00000034497 Dasypus novemcinctus ENSDNOG00000034497 I 0.815
ENSAMEG00000008458 Ailuropoda melanoleuca ENSAMEG00000008458 I 0.815
ENSSTOG00000004168 Ictidomys tridecemlineatus ENSSTOG00000004168 I 0.815
ENSOCUG00000006928 Oryctolagus cuniculus ENSOCUG00000006928 I 0.815
ENSCHOG00000011608 Choloepus hoffmanni ENSCHOG00000011608 I 0.812
XBP1 Callithrix jacchus ENSCJAG00000020084 I 0.811
Pvit_02423 Pogona vitticeps Pvit_02423 I 0.805
HelroG193172 Helobdella robusta HelroG193172 N 0.792
ENSMGAG00000007147 Meleagris gallopavo ENSMGAG00000007147 I 0.789