XP_002937859 (Xenopus tropicalis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XP_002937859 T073134_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN

NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.829 0.774
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN

NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.829 0.774
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN

NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.829 0.774
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN

NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.829 0.774
TEF
M09983_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.829 0.774
TEF
M09984_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.829 0.774
TEF
M09985_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.829 0.774
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY

RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.829 0.774
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN

NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.829 0.774
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN

NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.826 0.887
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN

NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.826 0.887
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN

NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.826 0.887
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB

VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.826 0.887
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS

SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.826 0.887
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH

DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.826 0.887
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY

RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.826 0.887
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN

NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.826 0.887
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937859 bZIP 220 284

Links

Other bZIP family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action