CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc00226
(
Meloidogyne incognita
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Minc00226
T073427_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NRL
M02835_2.00
Homo sapiens
VTCAGCRNDHN
NDHNYGCTGAB
SELEX
Jolma et al.(2013)
NRL_1
0.807
0.458
NRL
M04277_2.00
Homo sapiens
NGTCAGCRNDWHN
NDWHNYGCTGACN
SELEX
Yin et al.(2017)
NRL_eDBD_HT-SELEX
0.807
0.458
NRL
M04279_2.00
Homo sapiens
HGTCAGCANWWWH
DWWWNTGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_HT-SELEX
0.807
0.458
NRL
M04278_2.00
Homo sapiens
NRTCAGCRNDWHN
NDWHNYGCTGAYN
SELEX
Yin et al.(2017)
NRL_eDBD_Methyl-HT-SELEX
0.807
0.458
NRL
M04280_2.00
Homo sapiens
HGTCAGCRNWWHN
NDWWNYGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_Methyl-HT-SELEX
0.807
0.458
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc00226
bZIP
179
241
SALKQKRRTLKNRGYALNCRARRLKNQQQLEEENARLKIIINQQANLLAEYERKLGRETQQLQ
Links
Other
bZIP
family TFs
Other
Meloidogyne incognita
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy