CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000399501
(
Haemonchus placei
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
HPLM_0000399501
T074597_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MAFA
M04351_2.00
Homo sapiens
HGTCAGCANWWWN
NWWWNTGCTGACD
SELEX
Yin et al.(2017)
MAFA_eDBD_HT-SELEX_1
0.789
0.550
MAFA
M04352_2.00
Homo sapiens
NYGCTGASTCAGCRN
NYGCTGASTCAGCRN
SELEX
Yin et al.(2017)
MAFA_eDBD_HT-SELEX_2
0.789
0.550
MAFA
M04353_2.00
Homo sapiens
NTGCTGACRTMAGCAN
NTGCTKAYGTCAGCAN
SELEX
Yin et al.(2017)
MAFA_eDBD_HT-SELEX_3
0.789
0.550
Mafa
M09497_2.00
Mus musculus
YVWGTCAGCA
TGCTGACWBR
Misc
Heinz et al.(2010)
Islet-MafA_GSE30298
0.789
0.550
MAFA
M10008_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LMAF_Q2
0.789
0.550
MAFA
M10009_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAFA_Q4_01
0.789
0.550
MAFA
M10010_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAFA_Q4
0.789
0.550
MAFA
M10011_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAFA_Q5
0.789
0.550
MAFA
M04354_2.00
Homo sapiens
NYGCTGASTCAGCRN
NYGCTGASTCAGCRN
SELEX
Yin et al.(2017)
MAFA_eDBD_Methyl-HT-SELEX_1
0.789
0.550
MAFA
M04355_2.00
Homo sapiens
NYGCTKACRTMAGCRN
NYGCTKAYGTMAGCRN
SELEX
Yin et al.(2017)
MAFA_eDBD_Methyl-HT-SELEX_2
0.789
0.550
MAFA
M04356_2.00
Homo sapiens
HGTCAGCRNWWHN
NDWWNYGCTGACD
SELEX
Yin et al.(2017)
MAFA_eDBD_Methyl-HT-SELEX_3
0.789
0.550
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000399501-mRNA-1
bZIP
8
47
TMMKQKRRTLKNRGYALNCRVRRIQNQLQLEADNIQLRDQ
Links
Other
bZIP
family TFs
Other
Haemonchus placei
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy