CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g3194
(
Steinernema carpocapsae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
L596_g3194
T074638_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ces-2
M01830_2.00
Caenorhabditis elegans
ATTAYRTAA
TTAYRTAAT
PBM
Weirauch et al.(2014)
pTH9480
0.821
0.621
ces-2
M10052_2.00
Caenorhabditis elegans
RTTACGYAAY
RTTRCGTAAY
Transfac
Matys et al.(2006)
N$CES2_01
0.821
0.621
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.783
0.586
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.783
0.586
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g3194.t1
bZIP
142
199
YWERRRKNNDAAKRSRDSRRQKEDEIAVKAAILEQENMRLKVEVHRLREETTRLRVLI
L596_g3194.t2
bZIP
145
202
YWERRRKNNDAAKRSRDSRRQKEDEIAVKAAILEQENMRLKVEVHRLREETTRLRVLI
Links
Other
bZIP
family TFs
Other
Steinernema carpocapsae
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy