SVE_0161000 (Strongyloides venezuelensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 SVE_0161000 T075273_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NRL
M02835_2.00
Homo sapiens
VTCAGCRNDHN

NDHNYGCTGAB
SELEX
Jolma et al.(2013)
NRL_1
0.832 0.417
NRL
M04277_2.00
Homo sapiens
NGTCAGCRNDWHN

NDWHNYGCTGACN
SELEX
Yin et al.(2017)
NRL_eDBD_HT-SELEX
0.832 0.417
NRL
M04279_2.00
Homo sapiens
HGTCAGCANWWWH

DWWWNTGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_HT-SELEX
0.832 0.417
NRL
M04278_2.00
Homo sapiens
NRTCAGCRNDWHN

NDWHNYGCTGAYN
SELEX
Yin et al.(2017)
NRL_eDBD_Methyl-HT-SELEX
0.832 0.417
NRL
M04280_2.00
Homo sapiens
HGTCAGCRNWWHN

NDWWNYGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_Methyl-HT-SELEX
0.832 0.417
tj
M03632_2.00
Drosophila melanogaster
HGTCAGCANWWH

DWWNTGCTGACD
SELEX
Nitta et al.(2015)
tj_1
0.792 0.417
tj
M03633_2.00
Drosophila melanogaster
NNNYGCHDHGTCAGCANWW

WWNTGCTGACDHDGCRNNN
SELEX
Nitta et al.(2015)
tj_2
0.792 0.417
tj
M06015_2.00
Drosophila melanogaster
GCKDMSTCAGCA

TGCTGASKHMGC
B1H
Zhu et al.(2011)
tj_SANGER_5_FBgn0000964
0.792 0.417
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0161000.1 bZIP 70 129

Links

Other bZIP family TFs
Other Strongyloides venezuelensis TFs

Invalid Input OrderBy

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action