SVUK_0001190001 (Strongylus vulgaris)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 SVUK_0001190001 T075299_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MAFA
M04351_2.00
Homo sapiens
HGTCAGCANWWWN

NWWWNTGCTGACD
SELEX
Yin et al.(2017)
MAFA_eDBD_HT-SELEX_1
0.789 0.548
MAFA
M04352_2.00
Homo sapiens
NYGCTGASTCAGCRN

NYGCTGASTCAGCRN
SELEX
Yin et al.(2017)
MAFA_eDBD_HT-SELEX_2
0.789 0.548
MAFA
M04353_2.00
Homo sapiens
NTGCTGACRTMAGCAN

NTGCTKAYGTCAGCAN
SELEX
Yin et al.(2017)
MAFA_eDBD_HT-SELEX_3
0.789 0.548
Mafa
M09497_2.00
Mus musculus
YVWGTCAGCA

TGCTGACWBR
Misc
Heinz et al.(2010)
Islet-MafA_GSE30298
0.789 0.548
MAFA
M10008_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LMAF_Q2
0.789 0.548
MAFA
M10009_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAFA_Q4_01
0.789 0.548
MAFA
M10010_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAFA_Q4
0.789 0.548
MAFA
M10011_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAFA_Q5
0.789 0.548
MAFA
M04354_2.00
Homo sapiens
NYGCTGASTCAGCRN

NYGCTGASTCAGCRN
SELEX
Yin et al.(2017)
MAFA_eDBD_Methyl-HT-SELEX_1
0.789 0.548
MAFA
M04355_2.00
Homo sapiens
NYGCTKACRTMAGCRN

NYGCTKAYGTMAGCRN
SELEX
Yin et al.(2017)
MAFA_eDBD_Methyl-HT-SELEX_2
0.789 0.548
MAFA
M04356_2.00
Homo sapiens
HGTCAGCRNWWHN

NDWWNYGCTGACD
SELEX
Yin et al.(2017)
MAFA_eDBD_Methyl-HT-SELEX_3
0.789 0.548
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001190001-mRNA-1 bZIP 49 90

Links

Other bZIP family TFs
Other Strongylus vulgaris TFs

Invalid Input OrderBy

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action