CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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atf7b
(
Takifugu rubripes
)
bZIP,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
PF00096 (zf-C2H2)
IPR011616
IPR007087
ENSTRUG00000007560
T075537_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF7
M02872_2.00
Homo sapiens
NDRTGACGTCATNN
NNATGACGTCAYHN
SELEX
Jolma et al.(2013)
ATF7_1
0.736
0.736
ATF7
M04382_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF7_eDBD_HT-SELEX
0.736
0.736
ATF7
M04383_2.00
Homo sapiens
NRTKAYGTMATN
NATKACRTMAYN
SELEX
Yin et al.(2017)
ATF7_eDBD_Methyl-HT-SELEX
0.736
0.736
Atf7
M09499_2.00
Mus musculus
NNVTGACRTCAB
VTGAYGTCABNN
Misc
Heinz et al.(2010)
3T3L1-Atf7_GSE56872
0.724
0.724
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000018735
C2H2 ZF
7
31
FVCNAPGCGQRFTNEDHLSVHKHKH
ENSTRUP00000018735
bZIP
330
406
DPDERRQRFLERNRAAASRCRQKRKLWVNSLEKKADDLANMNVSLTATTLTRSHIVLLNSEVTLLRNEVAQLKQLLL
ENSTRUP00000018736
C2H2 ZF
7
31
FVCNAPGCGQRFTNEDHLSVHKHKH
ENSTRUP00000018736
bZIP
329
392
DPDERRQRFLERNRAAASRCRQKRKLWVNSLEKKADDLANMNVSLTSEVTLLRNEVAQLKQLLL
ENSTRUP00000018737
C2H2 ZF
7
31
FVCNAPGCGQRFTNEDHLSVHKHKH
ENSTRUP00000018737
bZIP
262
325
DPDERRQRFLERNRAAASRCRQKRKLWVNSLEKKADDLANMNVSLTSEVTLLRNEVAQLKQLLL
ENSTRUP00000018738
C2H2 ZF
7
31
FVCNAPGCGQRFTNEDHLSVHKHKH
Links
Other
bZIP,C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy