Ocbimv22037954m.g (Octopus bimaculoides)
bZIP,C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1)
PF00096 (zf-C2H2) 		IPR011616
IPR007087 		Ocbimv22037954m.g T075556_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Creb5
M02866_2.00 		Mus musculus
NATGACGTCAYH
DRTGACGTCATN		 SELEX
Jolma et al.(2013)
Creb5_1 		0.870 0.750
Atf7
M09499_2.00 		Mus musculus
NNVTGACRTCAB
VTGAYGTCABNN		 Misc
Heinz et al.(2010)
3T3L1-Atf7_GSE56872 		0.747 0.747
CREB5
M04299_2.00 		Homo sapiens
NVTKACRTMABN
NVTKAYGTMABN		 SELEX
Yin et al.(2017)
CREB5_eDBD_HT-SELEX 		0.870 0.750
ATF7
M02872_2.00 		Homo sapiens
NDRTGACGTCATNN
NNATGACGTCAYHN		 SELEX
Jolma et al.(2013)
ATF7_1 		0.736 0.736
CREB5
M04301_2.00 		Homo sapiens
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Yin et al.(2017)
CREB5_FL_HT-SELEX 		0.870 0.750
ATF7
M04382_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF7_eDBD_HT-SELEX 		0.736 0.736
CREB5
M04300_2.00 		Homo sapiens
NRTKACRTCAYN
NRTGAYGTMAYN		 SELEX
Yin et al.(2017)
CREB5_eDBD_Methyl-HT-SELEX 		0.870 0.750
ATF7
M04383_2.00 		Homo sapiens
NRTKAYGTMATN
NATKACRTMAYN		 SELEX
Yin et al.(2017)
ATF7_eDBD_Methyl-HT-SELEX 		0.736 0.736
CREB5
M04302_2.00 		Homo sapiens
NATGACRTCAYN
NRTGAYGTCATN		 SELEX
Yin et al.(2017)
CREB5_FL_Methyl-HT-SELEX 		0.870 0.750
Atf7
M01823_2.00 		Mus musculus
HKACGTMAYN
NRTKACGTMD		 PBM
Weirauch et al.(2014)
pTH5081 		0.854 0.719
Atf2
M01808_2.00 		Mus musculus
NRTKAYGYMD
HKRCRTMAYN		 PBM
Weirauch et al.(2014)
pTH5083 		0.847 0.750
Atf2
M08827_2.00 		Mus musculus
VTGACVTCABY
RVTGABGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF2_MOUSE.H11MO.0.A 		0.847 0.750
Atf2
M09493_2.00 		Mus musculus
NNVTGABVTCAB
VTGABVTCABNN		 Misc
Heinz et al.(2010)
3T3L1-Atf2_GSE56872 		0.847 0.750
asl-1
M01147_2.00 		Neurospora crassa
NVTKACGHNN
NNDCGTMABN		 PBM
Lambert et al.(2019)
pTH8918 		0.801 0.469
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22037953m.p bZIP 238 301
Ocbimv22037954m.p C2H2 ZF 9 33
Ocbimv22037954m.p bZIP 441 504

Links

Other bZIP,C2H2 ZF family TFs
Other Octopus bimaculoides TFs

Invalid Input OrderBy

406 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action