OBART02G33400 (Oryza barthii)
bZIP,MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1)
PF00319 (SRF-TF) 		IPR011616
IPR002100 		OBART02G33400 T075604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS22
M10087_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS22_01 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G33400.1 MADS box 10 57
OBART02G33400.1 bZIP 145 180
OBART02G33400.2 MADS box 10 57
OBART02G33400.2 bZIP 145 180

Links

Other bZIP,MADS box family TFs
Other Oryza barthii TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC02G30720 Oryza punctata OPUNC02G30720 I 1.000
ORUFI02G34940 Oryza rufipogon ORUFI02G34940 I 1.000
MADS22 Oryza sativa OS02G0761000 D 1.000
ONIVA02G35910 Oryza nivara ONIVA02G35910 I 1.000
OMERI02G31880 Oryza meridionalis OMERI02G31880 I 1.000
BGIOSGA009093 Oryza indica BGIOSGA009093 I 1.000
OGLUM02G33890 Oryza glumaepatula OGLUM02G33890 I 1.000
OLONG_001081 Oryza longistaminata OLONG_001081 I 0.949
Pavir.Aa00556 Panicum virgatum Pavir.Aa00556 I 0.929