OLONG_001081 (Oryza longistaminata)
bZIP,MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1)
PF00319 (SRF-TF)
IPR011616
IPR002100
OLONG_001081 T075606_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS22
M10087_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS22_01
0.949 0.949
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_001081-R1 MADS box 14 56
OLONG_001081-R1 bZIP 144 179

Links

Other bZIP,MADS box family TFs
Other Oryza longistaminata TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OPUNC02G30720 Oryza punctata OPUNC02G30720 I 0.949
ORUFI02G34940 Oryza rufipogon ORUFI02G34940 I 0.949
MADS22 Oryza sativa OS02G0761000 D 0.949
BGIOSGA009093 Oryza indica BGIOSGA009093 I 0.949
ONIVA02G35910 Oryza nivara ONIVA02G35910 I 0.949
OBART02G33400 Oryza barthii OBART02G33400 I 0.949
OGLUM02G33890 Oryza glumaepatula OGLUM02G33890 I 0.949
OMERI02G31880 Oryza meridionalis OMERI02G31880 I 0.949
Pavir.Aa00556 Panicum virgatum Pavir.Aa00556 I 0.873