CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA02G35910
(
Oryza nivara
)
bZIP,MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
PF00319 (SRF-TF)
IPR011616
IPR002100
ONIVA02G35910
T075608_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MADS22
M10087_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS22_01
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA02G35910.1
MADS box
10
57
RIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF
ONIVA02G35910.1
bZIP
145
180
FMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV
Links
Other
bZIP,MADS box
family TFs
Other
Oryza nivara
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy