CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MADS22
(
Oryza sativa
)
bZIP,MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
PF00319 (SRF-TF)
IPR011616
IPR002100
OS02G0761000
T075611_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MADS22
M10087_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS22_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS02T0761000-01
MADS box
10
57
RIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF
OS02T0761000-01
bZIP
145
180
FMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV
Links
Other
bZIP,MADS box
family TFs
Other
Oryza sativa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy