CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ab02020
(
Panicum virgatum
)
bZIP,MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
PF00319 (SRF-TF)
IPR011616
IPR002100
Pavir.Ab02020
T075614_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab02020.1.p
MADS box
10
57
RIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY
Pavir.Ab02020.1.p
bZIP
132
185
TSLRGVRAKKDHLLIDEIHELNRKASLFHQENMDLYNKINQIRQENSELYKKIY
Links
Other
bZIP,MADS box
family TFs
Other
Panicum virgatum
TFs
0 Related TFs
">No related TF found