CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_147000082
(
Branchiostoma floridae
)
C2H2 ZF,FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF03101 (FAR1)
IPR007087
IPR004330
fgenesh2_pg.scaffold_147000082
T075645_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_147000082
C2H2 ZF
17
40
FSCSRCNFVFFCEDSLKKHLAEVH
fgenesh2_pg.scaffold_147000082
C2H2 ZF
62
85
FTCSLCNKTFNLKNTLNRHLIRAH
fgenesh2_pg.scaffold_147000082
C2H2 ZF
107
130
FSCTHCDKSFSCKFNLKRHWRDFH
fgenesh2_pg.scaffold_147000082
FAR1
198
282
VQFTKQGGSTLGKLSRYSYYICQHDGSDRAHCARGQPQRLSSRRNKKGRVKTGAICPARMLVKAELNSSVLRVTYVSSHNHEPRP
Links
Other
C2H2 ZF,FAR1
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found