CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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Ocbimv22017021m.g
(
Octopus bimaculoides
)
C2H2 ZF,GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00320 (GATA)
IPR007087
IPR000679
Ocbimv22017021m.g
T075666_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22017019m.p
GATA
302
339
CESCYAANSSQWYSWGPAHMQCRLCSSCWIYWKKYGGL
Ocbimv22017019m.p
C2H2 ZF
373
398
HRCTIAGCGKEFKLKPHLARHLATAH
Ocbimv22017020m.p
GATA
302
339
CESCYAANSSQWYSWGPAHMQCRLCSSCWIYWKKYGGL
Ocbimv22017020m.p
C2H2 ZF
357
382
HRCTIAGCGKEFKLKPHLARHLATAH
Ocbimv22017021m.p
GATA
302
339
CESCYAANSSQWYSWGPAHMQCRLCSSCWIYWKKYGGL
Ocbimv22017021m.p
C2H2 ZF
373
398
HRCTIAGCGKEFKLKPHLARHLATAH
Ocbimv22017022m.p
GATA
302
339
CESCYAANSSQWYSWGPAHMQCRLCSSCWIYWKKYGGL
Ocbimv22017022m.p
C2H2 ZF
357
382
HRCTIAGCGKEFKLKPHLARHLATAH
Links
Other
C2H2 ZF,GATA
family TFs
Other
Octopus bimaculoides
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10010713
Crassostrea gigas
CGI_10010713
N
0.962
AMEC011208
Anopheles melas
AMEC011208
N
0.771
AMEM003021
Anopheles merus
AMEM003021
N
0.771
AFUN002471
Anopheles funestus
AFUN002471
N
0.771
ASTEI08674
Anopheles stephensi
ASTEI08674
N
0.771
AGAP004341
Anopheles gambiae
AGAP004341
N
0.771
AQUA008419
Anopheles quadriannulatus
AQUA008419
N
0.771
AEPI001446
Anopheles epiroticus
AEPI001446
N
0.771
AARA005300
Anopheles arabiensis
AARA005300
N
0.771
ACOM040987
Anopheles coluzzii
ACOM040987
N
0.771
ACHR003843
Anopheles christyi
ACHR003843
N
0.771
AMAM023871
Anopheles maculatus
AMAM023871
N
0.762
AMIN004741
Anopheles minimus
AMIN004741
N
0.762
ACUA024077
Anopheles culicifacies
ACUA024077
N
0.762
AALB003602
Anopheles albimanus
AALB003602
N
0.760
AFAF017814
Anopheles farauti
AFAF017814
N
0.760
AATE004813
Anopheles atroparvus
AATE004813
N
0.750
TMUE_s0005016500
Trichuris muris
TMUE_s0005016500
N
0.702