CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30036706m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF,GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00320 (GATA)
IPR007087
IPR000679
Sakowv30036706m.g
T075667_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23938544_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938544_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938544_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938545_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938545_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938545_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938546_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938546_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938546_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938547_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938547_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938547_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938548_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938549_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938550_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938551_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
Links
Other
C2H2 ZF,GATA
family TFs
Other
Saccoglossus kowalevskii
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000006350
Ovis aries
ENSOARG00000006350
N
0.902
SPU_007389
Strongylocentrotus purpuratus
SPU_007389
N
0.901
ENSOANG00000004258
Ornithorhynchus anatinus
ENSOANG00000004258
N
0.890
SPU_003705
Strongylocentrotus purpuratus
SPU_003705
N
0.883
e_gw.68.282.1
Branchiostoma floridae
e_gw.68.282.1
N
0.878
ENSLACG00000005237
Latimeria chalumnae
ENSLACG00000005237
N
0.878
ENSLOCG00000014580
Lepisosteus oculatus
ENSLOCG00000014580
N
0.878
ENSOARG00000001263
Ovis aries
ENSOARG00000001263
N
0.866
Mta1
Dipodomys ordii
ENSDORG00000001352
N
0.864
mta2.L
Xenopus laevis
XB-GENE-947634
N
0.841
SMAR013016
Strigamia maritima
SMAR013016
N
0.841
MTA2
Choloepus hoffmanni
ENSCHOG00000007762
N
0.841
BGLB005972
Biomphalaria glabrata
BGLB005972
N
0.841
LotgiG180212
Lottia gigantea
LotgiG180212
N
0.829
MTA2
Echinops telfairi
ENSETEG00000014846
N
0.824
L798_08977
Zootermopsis nevadensis
L798_08977
N
0.817
TC008832
Tribolium castaneum
TC008832
N
0.817
YQE_11825
Dendroctonus ponderosae
YQE_11825
N
0.805
CpipJ_CPIJ005379
Culex pipiens
CpipJ_CPIJ005379
N
0.793
GB44679
Apis mellifera
GB44679
N
0.793
AAEL018695
Aedes aegypti
AAEL018695
N
0.793
NV14853
Nasonia vitripennis
NV14853
N
0.793
CPIJ005379
Culex quinquefasciatus
CPIJ005379
N
0.793
ENSCING00000006442
Ciona intestinalis
ENSCING00000006442
N
0.793
ENSCSAVG00000000171
Ciona savignyi
ENSCSAVG00000000171
N
0.793
SINV11811
Solenopsis invicta
SINV11811
N
0.780
ISCW003309
Ixodes scapularis
ISCW003309
N
0.780
ACEP14882
Atta cephalotes
ACEP14882
N
0.780
LCUP000011
Lucilia cuprina
LCUP000011
N
0.778
BGIBMGA004821
Bombyx mori
BGIBMGA004821
N
0.768
ASU_04577
Ascaris suum
ASU_04577
N
0.768
D917_06199
Trichinella nativa
D917_06199
N
0.765
EFV54708
Trichinella spiralis
EFV54708
N
0.765
TCNE_0001907801
Toxocara canis
TCNE_0001907801
N
0.756
MDOA009084
Musca domestica
MDOA009084
N
0.756
Cflo_10027--XP_396763.3_APIME
Camponotus floridanus
Cflo_10027--XP_396763.3_APIME
N
0.756
ADIR005407
Anopheles dirus
ADIR005407
N
0.744
EVEC_0001015201
Enterobius vermicularis
EVEC_0001015201
N
0.744
HelroG187398
Helobdella robusta
HelroG187398
N
0.744
KGM_11481
Danaus plexippus
KGM_11481
N
0.744
HMEL015594
Heliconius melpomene
HMEL015594
N
0.744
SMUV_0000864901
Syphacia muris
SMUV_0000864901
N
0.732
GF17406
Drosophila ananassae
FBgn0094424
N
0.732
GG10908
Drosophila erecta
FBgn0103212
N
0.732
GD19594
Drosophila simulans
FBgn0191087
N
0.728
GM10605
Drosophila sechellia
FBgn0165551
N
0.728
GE24151
Drosophila yakuba
FBgn0241285
N
0.728
TELCIR_06695
Teladorsagia circumcincta
TELCIR_06695
N
0.728
ACYPI001458
Acyrthosiphon pisum
ACYPI001458
N
0.721
DME_0000980101
Dracunculus medinensis
DME_0000980101
N
0.720
GK10851
Drosophila willistoni
FBgn0212862
N
0.720
NBR_0001426901
Nippostrongylus brasiliensis
NBR_0001426901
N
0.716
MTA1-like
Drosophila melanogaster
FBgn0027951
N
0.716
HCOI00708300
Haemonchus contortus
HCOI00708300
N
0.716
scaffold26-EXSNAP2012.56
Pristionchus exspectatus
scaffold26-EXSNAP2012.56
N
0.707
ANCCAN_04914
Ancylostoma caninum
ANCCAN_04914
N
0.707
GJ10798
Drosophila virilis
FBgn0198069
N
0.707
GA27157
Drosophila pseudoobscura
FBgn0248528
N
0.707
GL23145
Drosophila persimilis
FBgn0160735
N
0.707
GI24226
Drosophila mojavensis
FBgn0146949
N
0.707
ANCCEY_13862
Ancylostoma ceylanicum
ANCCEY_13862
N
0.707
GH19193
Drosophila grimshawi
FBgn0126660
N
0.707
ANCDUO_01695
Ancylostoma duodenale
ANCDUO_01695
N
0.707