CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30036706m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF,GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00320 (GATA)
IPR007087
IPR000679
Sakowv30036706m.g
T075667_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23938544_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938544_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938544_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938545_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938545_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938545_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938546_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938546_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938546_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938547_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938547_peptide
C2H2 ZF
440
462
YACNVCNKAFYRQERLAAHMSAH
23938547_peptide
C2H2 ZF
465
490
FRCTISGCGKEFKLKSHLARHCQTVH
23938548_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938549_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938550_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
23938551_peptide
GATA
365
402
CESCYAGSSFQWYSWGPANMQCRLCAACWIYWKKYGGL
Links
Other
C2H2 ZF,GATA
family TFs
Other
Saccoglossus kowalevskii
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy