CBN31083 (Caenorhabditis brenneri)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
CBN31083 T075733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBN31083 C2H2 ZF 24 46
CBN31083 C2H2 ZF 52 73
CBN31083 Homeodomain 234 290
CBN31083 C2H2 ZF 497 519
CBN31083 C2H2 ZF 525 547
CBN31083 C2H2 ZF 553 574

Links

Other C2H2 ZF,Homeodomain family TFs
Other Caenorhabditis brenneri TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.000
ORGLA11G0190300 Oryza glaberrima ORGLA11G0190300 N 0.000
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.000
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.000
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N 0.000
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.000
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.000
Traes_5BS_ED54C58C5 Triticum aestivum Traes_5BS_ED54C58C5 N 0.000
Traes_5DS_C06FE6037 Triticum aestivum Traes_5DS_C06FE6037 N 0.000
TRIUR3_22881 Triticum urartu TRIUR3_22881 N 0.000
Pavir.Ha00317 Panicum virgatum Pavir.Ha00317 N 0.000
Pavir.J08330 Panicum virgatum Pavir.J08330 N 0.000
Pavir.J28748 Panicum virgatum Pavir.J28748 N 0.000
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.000
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.000
ONIVA11G23190 Oryza nivara ONIVA11G23190 N 0.000
BRADI2G52227 Brachypodium distachyon BRADI2G52227 N 0.000
BRADI4G03867 Brachypodium distachyon BRADI4G03867 N 0.000
F775_32974 Aegilops tauschii F775_32974 N 0.000
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.000
GRMZM2G179325 Zea mays GRMZM2G179325 N 0.000
LPERR12G13750 Leersia perrieri LPERR12G13750 N 0.000
MLOC_21297 Hordeum vulgare MLOC_21297 N 0.000
OB12G23410 Oryza brachyantha OB12G23410 N 0.000
OBART11G23670 Oryza barthii OBART11G23670 N 0.000
OBART12G16530 Oryza barthii OBART12G16530 N 0.000
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.000
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.000
Pavir.J38998 Panicum virgatum Pavir.J38998 N 0.000