CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFV59106
(
Trichinella spiralis
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
EFV59106
T075763_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFV59106
C2H2 ZF
40
62
FKCPHCVKAFKFKHHLKEHERIH
EFV59106
C2H2 ZF
68
89
FQCPHCLKRFSHSGSFSSHMNR
EFV59106
Homeodomain
226
282
SRNRNYLSEEQVAVLNNHYRNKPFPSKAELAALAAHLGIGKRVVQVWFQNTRAKERR
EFV59106
C2H2 ZF
555
577
YACDQCDKMFGKQSSLARHKYEH
EFV59106
C2H2 ZF
583
605
YKCDVCEKAFKHKHHLTEHKRLH
EFV59106
C2H2 ZF
611
632
FQCNKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Trichinella spiralis
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D917_10103
Trichinella nativa
D917_10103
N
0.982
DICVIV_05785
Dictyocaulus viviparus
DICVIV_05785
N
0.877
TMUE_s0010015900
Trichuris muris
TMUE_s0010015900
N
0.858
D918_03480
Trichuris suis
D918_03480
N
0.858
TTRE_0000009201
Trichuris trichiura
TTRE_0000009201
N
0.858
ASU_02713
Ascaris suum
ASU_02713
N
0.818
Bm3681
Brugia malayi
Bm3681
N
0.818
LOAG_17507
Loa loa
LOAG_17507
N
0.818
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.818
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.806
SBAD_0000454101
Soboliphyme baturini
SBAD_0000454101
N
0.805
L893_g27223
Steinernema glaseri
L893_g27223
N
0.800
L898_g6841
Steinernema monticolum
L898_g6841
N
0.800
L892_g21703
Steinernema scapterisci
L892_g21703
N
0.800
L889_g29456
Steinernema feltiae
L889_g29456
N
0.800
L596_g23719
Steinernema carpocapsae
L596_g23719
N
0.800
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.800
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
0.794
zag-1
Caenorhabditis elegans
WBGene00006970
N
0.794
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
0.794
CBN31083
Caenorhabditis brenneri
CBN31083
N
0.788
CJA12606
Caenorhabditis japonica
CJA12606
N
0.788
CRE10982
Caenorhabditis remanei
CRE10982
N
0.788
CBG10736
Caenorhabditis briggsae
CBG10736
N
0.788
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.788
CBN24068
Caenorhabditis brenneri
CBN24068
N
0.788
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.788
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
0.782
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
0.759
YQE_04155
Dendroctonus ponderosae
YQE_04155
N
0.712
YQE_00812
Dendroctonus ponderosae
YQE_00812
N
0.712
SINV25541
Solenopsis invicta
SINV25541
N
0.700
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
0.700