CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000004340
(
Astyanax mexicanus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSAMXG00000004340
T075775_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.978
0.978
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000004458
C2H2 ZF
687
710
LKCPKCNWHYKYQQTLEAHMKEKH
ENSAMXP00000004458
C2H2 ZF
742
766
FRCEVCNYSTTTKGNLSIHMQSDKH
ENSAMXP00000004458
C2H2 ZF
823
847
WRCEVCDYETNVARNLRIHMTSEKH
ENSAMXP00000004458
C2H2 ZF
1105
1129
YHCVLCNYSTKAKLNLIQHVRSMKH
ENSAMXP00000004458
C2H2 ZF
1386
1411
FLCWKKGCNQVFKSSNALQMHFNEVH
ENSAMXP00000004458
C2H2 ZF
1427
1449
YRCNQCSLAFKTIEKLQLHSQYH
ENSAMXP00000004458
C2H2 ZF
1455
1478
TMCCLCQRSFRTLQALKKHLETSH
ENSAMXP00000004458
C2H2 ZF
1572
1596
FKCTVCKESFTQKNILLVHYNSVSH
ENSAMXP00000004458
C2H2 ZF
1623
1647
FKCSTCNVAYSQSSTLEIHMRSVLH
ENSAMXP00000004458
Homeodomain
2193
2249
KRPRTRITDDQLRVLRQYFDINNSPNEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ
ENSAMXP00000004458
Homeodomain
2290
2346
RSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLSLPTRVIVVWFQNARQKARK
ENSAMXP00000004458
C2H2 ZF
2376
2397
YQCKKCSLVFQRIFDLIKHQKK
ENSAMXP00000004458
C2H2 ZF
2575
2597
YQCEQCKLAFPSFEHWQEHQQLH
ENSAMXP00000004458
Homeodomain
2687
2743
KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK
ENSAMXP00000004458
C2H2 ZF
2757
2779
RCPFCRALFKAKTALEAHIRSRH
ENSAMXP00000004458
Homeodomain
2987
3043
KRFRTQMTNLQLKVLKSCFSDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Astyanax mexicanus
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy