CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZEB1
(
Canis familiaris
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSCAFG00000004023
T075790_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
1.000
1.000
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
1.000
1.000
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
1.000
1.000
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
1.000
1.000
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
1.000
1.000
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
1.000
1.000
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
1.000
1.000
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
1.000
1.000
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
1.000
1.000
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
1.000
1.000
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
1.000
1.000
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.986
0.986
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.986
0.986
ZEB2
M10096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.837
0.837
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000005968
C2H2 ZF
171
194
LTCPYCDRGYKRFTSLKEHIKYRH
ENSCAFP00000005968
C2H2 ZF
201
223
FSCSLCSYTFAYRTQLERHMTSH
ENSCAFP00000005968
C2H2 ZF
241
263
FKCTECGKAFKYKHHLKEHLRIH
ENSCAFP00000005968
C2H2 ZF
269
290
YECPNCKKRFSHSGSYSSHISS
ENSCAFP00000005968
Homeodomain
586
634
QPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQA
ENSCAFP00000005968
C2H2 ZF
904
926
YACDLCDKIFQKSSSLLRHKYEH
ENSCAFP00000005968
C2H2 ZF
932
954
HECGICKKAFKHKHHLIEHMRLH
ENSCAFP00000005968
C2H2 ZF
960
981
YQCDKCGKRFSHSGSYSQHMNH
ENSCAFP00000005970
C2H2 ZF
131
154
LTCPYCDRGYKRFTSLKEHIKYRH
ENSCAFP00000005970
C2H2 ZF
161
183
FSCSLCSYTFAYRTQLERHMTSH
ENSCAFP00000005970
C2H2 ZF
229
250
YECPNCKKRFSHSGSYSSHISS
ENSCAFP00000005970
Homeodomain
546
594
QPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQA
ENSCAFP00000005970
C2H2 ZF
864
886
YACDLCDKIFQKSSSLLRHKYEH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Canis familiaris
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy