zeb1a (Danio rerio)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSDARG00000016788 T075815_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.778 0.778
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.778 0.778
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.778 0.778
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.778 0.778
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.778 0.778
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.778 0.778
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.778 0.778
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.778 0.778
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.778 0.778
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.778 0.778
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.778 0.778
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.778 0.778
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.778 0.778
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000024857 C2H2 ZF 132 155
ENSDARP00000024857 C2H2 ZF 162 184
ENSDARP00000024857 C2H2 ZF 201 223
ENSDARP00000024857 C2H2 ZF 229 250
ENSDARP00000024857 Homeodomain 706 753
ENSDARP00000024857 C2H2 ZF 985 1007
ENSDARP00000024857 C2H2 ZF 1013 1035
ENSDARP00000024857 C2H2 ZF 1041 1062
ENSDARP00000114082 C2H2 ZF 146 169
ENSDARP00000114082 C2H2 ZF 176 198
ENSDARP00000114082 C2H2 ZF 215 237
ENSDARP00000114082 C2H2 ZF 243 264
ENSDARP00000114082 Homeodomain 720 767
ENSDARP00000114082 C2H2 ZF 999 1021
ENSDARP00000114082 C2H2 ZF 1027 1049
ENSDARP00000114082 C2H2 ZF 1055 1076
ENSDARP00000120561 C2H2 ZF 132 155
ENSDARP00000120561 C2H2 ZF 162 184

Links

Other C2H2 ZF,Homeodomain family TFs
Other Danio rerio TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.859
zeb1b Danio rerio ENSDARG00000013207 I 0.783
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.783
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.778
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.778
Aan_R013683 Calypte anna Aan_R013683 I 0.778
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.778
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.778
ZEB1 Sorex araneus ENSSARG00000010985 I 0.778
Zeb1 Mus musculus ENSMUSG00000024238 D 0.778
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.778
Tal_R009077 Tyto alba Tal_R009077 I 0.778
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.778
ZEB1 Gallus gallus ENSGALG00000007260 I 0.778
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.774
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.774
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.774
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.774
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.774
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.774
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.774
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.774
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.774
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.774
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.774
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.774
ZEB1 Felis catus ENSFCAG00000010440 I 0.774
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.774
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.774
ZEB1 Homo sapiens ENSG00000148516 D 0.774
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.774
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.774
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.774
ZEB1 Bos taurus ENSBTAG00000020053 I 0.774
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.774
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.774
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.774
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.774
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.774
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.774
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.774
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.773
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.773
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.770
zeb1.S Xenopus laevis XB-GENE-865109 I 0.768
ABC48601 Xenopus laevis ABC48601 I 0.768
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.763
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.755
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.755
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.755
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.754
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.749
zeb1b Oryzias latipes ENSORLG00000004296 I 0.744
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.744
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.735
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.729
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.729
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.729
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.729
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.729
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.729
ZEB2 Felis catus ENSFCAG00000015532 I 0.729
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.729
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.729
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.729
ZEB2 Equus caballus ENSECAG00000019355 I 0.729
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.729
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.729
zeb2.S Xenopus laevis XB-GENE-865280 I 0.729
XP_002936763 Xenopus tropicalis XP_002936763 I 0.729
XP_002936766 Xenopus tropicalis XP_002936766 I 0.729
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.729
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.729
ZEB2 Homo sapiens ENSG00000169554 D 0.729
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.729
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.729
ZEB2 Bos taurus ENSBTAG00000012615 I 0.729
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.729
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.729
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.729
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.729
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.729
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.729
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.729
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.729
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.729
Zeb2 Mus musculus ENSMUSG00000026872 I 0.729
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.729
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.729
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.729
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.729
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.729
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.729
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.729
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.729
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.729
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.729
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.725
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.725
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.725
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.725
Aan_R003058 Calypte anna Aan_R003058 I 0.725
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.725
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.725
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.725
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.725
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.723
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.722
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.716
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.710
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.710
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.705