zeb1a (Danio rerio)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSDARG00000016788 T075815_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.778 0.778
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.778 0.778
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.778 0.778
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.778 0.778
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.778 0.778
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.778 0.778
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.778 0.778
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.778 0.778
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.778 0.778
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.778 0.778
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.778 0.778
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.778 0.778
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.778 0.778
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000024857 C2H2 ZF 132 155
ENSDARP00000024857 C2H2 ZF 162 184
ENSDARP00000024857 C2H2 ZF 201 223
ENSDARP00000024857 C2H2 ZF 229 250
ENSDARP00000024857 Homeodomain 706 753
ENSDARP00000024857 C2H2 ZF 985 1007
ENSDARP00000024857 C2H2 ZF 1013 1035
ENSDARP00000024857 C2H2 ZF 1041 1062
ENSDARP00000114082 C2H2 ZF 146 169
ENSDARP00000114082 C2H2 ZF 176 198
ENSDARP00000114082 C2H2 ZF 215 237
ENSDARP00000114082 C2H2 ZF 243 264
ENSDARP00000114082 Homeodomain 720 767
ENSDARP00000114082 C2H2 ZF 999 1021
ENSDARP00000114082 C2H2 ZF 1027 1049
ENSDARP00000114082 C2H2 ZF 1055 1076
ENSDARP00000120561 C2H2 ZF 132 155
ENSDARP00000120561 C2H2 ZF 162 184

Links

Other C2H2 ZF,Homeodomain family TFs
Other Danio rerio TFs

Invalid Input OrderBy

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action