CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:ch73-386h18.1
(
Danio rerio
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSDARG00000073944
T075816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.793
0.793
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000103045
C2H2 ZF
568
591
LKCPKCNWHYKYQQTLEAHMKEKH
ENSDARP00000103045
C2H2 ZF
624
648
FRCQVCQYSTTTKGNLSIHMQSDKH
ENSDARP00000103045
C2H2 ZF
700
724
WRCEVCDYETNVARNLRIHMTSEKH
ENSDARP00000103045
C2H2 ZF
1197
1222
FPCWHKGCNKVFTSSSALQTHFNQIH
ENSDARP00000103045
C2H2 ZF
1238
1260
YRCNQCSLAFKTPEKLQLHSQYH
ENSDARP00000103045
C2H2 ZF
1266
1289
TMCCLCQRSFRTMQALRKHLETSH
ENSDARP00000103045
C2H2 ZF
1385
1409
FKCTVCKESFTQKNILLVHYNSVSH
ENSDARP00000103045
C2H2 ZF
1436
1460
FKCSICNVAYSQSSTLEIHMRSVLH
ENSDARP00000103045
Homeodomain
1964
2020
KRPRTRITDDQLRVLRQYFDINNSPNEDQIHEMANKSGLPHKVIKHWFRNTLFKERQ
ENSDARP00000103045
Homeodomain
2061
2117
RSSRTRFNDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLSTRVIVVWFQNARQKARK
ENSDARP00000103045
C2H2 ZF
2147
2168
FQCKKCNIVFQRIFDLINHQKK
ENSDARP00000103045
C2H2 ZF
2335
2357
YNCIQCKLSFPSFEHWQEHQQMH
ENSDARP00000103045
Homeodomain
2446
2502
KRMRTTITPEQLEVLYQKYLLDSNPTRKMLDHISNEVGLKKRVVQVWFQNTRARERK
ENSDARP00000103045
C2H2 ZF
2516
2538
RCPFCRALFKAQTALAAHIRSRH
ENSDARP00000103045
Homeodomain
2731
2787
KRYRTQMSNLQVKVLKACFSDYKTPTMLECEALGNDIGLAKRVVQVWFQNARAKEKK
ENSDARP00000113495
C2H2 ZF
568
591
LKCPKCNWHYKYQQTLEAHMKEKH
ENSDARP00000113495
C2H2 ZF
624
648
FRCQVCQYSTTTKGNLSIHMQSDKH
ENSDARP00000113495
C2H2 ZF
700
724
WRCEVCDYETNVARNLRIHMTSEKH
ENSDARP00000113495
C2H2 ZF
1197
1222
FPCWHKGCNKVFTSSSALQTHFNQIH
ENSDARP00000113495
C2H2 ZF
1238
1260
YRCNQCSLAFKTPEKLQLHSQYH
ENSDARP00000113495
C2H2 ZF
1266
1289
TMCCLCQRSFRTMQALRKHLETSH
ENSDARP00000113495
C2H2 ZF
1385
1409
FKCTVCKESFTQKNILLVHYNSVSH
ENSDARP00000113495
C2H2 ZF
1436
1460
FKCSICNVAYSQSSTLEIHMRSVLH
ENSDARP00000113495
Homeodomain
1964
2020
KRPRTRITDDQLRVLRQYFDINNSPNEDQIHEMANKSGLPHKVIKHWFRNTLFKERQ
ENSDARP00000113495
Homeodomain
2061
2117
RSSRTRFNDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLSTRVIVVWFQNARQKARK
ENSDARP00000113495
C2H2 ZF
2147
2168
FQCKKCNIVFQRIFDLINHQKK
ENSDARP00000113495
C2H2 ZF
2335
2357
YNCIQCKLSFPSFEHWQEHQQMH
ENSDARP00000113495
Homeodomain
2446
2502
KRMRTTITPEQLEVLYQKYLLDSNPTRKMLDHISNEVGLKKRVVQVWFQNTRARERK
ENSDARP00000113495
C2H2 ZF
2516
2538
RCPFCRALFKAQTALAAHIRSRH
ENSDARP00000113495
Homeodomain
2731
2787
KRYRTQMSNLQVKVLKACFSDYKTPTMLECEALGNDIGLAKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Danio rerio
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy