zeb2b (Danio rerio)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSDARG00000078416 T075818_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including convergent extension; mesenchymal cell differentiation; and regionalization. Predicted to be located in nucleus. Is expressed in several structures, including digestive system; nervous system; presumptive mesoderm; tail bud; and vagal neural crest. Human ortholog(s) of this gene implicated in Hirschsprung's disease and Mowat-Wilson syndrome. Orthologous to human ZEB2 (zinc finger E-box binding homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000084452 C2H2 ZF 191 214
ENSDARP00000084452 C2H2 ZF 221 243
ENSDARP00000084452 C2H2 ZF 262 284
ENSDARP00000084452 C2H2 ZF 290 311
ENSDARP00000084452 C2H2 ZF 561 582
ENSDARP00000084452 Homeodomain 629 678
ENSDARP00000084452 C2H2 ZF 985 1007
ENSDARP00000084452 C2H2 ZF 1013 1035
ENSDARP00000084452 C2H2 ZF 1041 1062
ENSDARP00000140713 C2H2 ZF 199 222
ENSDARP00000140713 C2H2 ZF 229 251
ENSDARP00000140713 C2H2 ZF 270 292
ENSDARP00000140713 C2H2 ZF 298 319
ENSDARP00000140713 C2H2 ZF 569 590
ENSDARP00000140713 Homeodomain 637 686
ENSDARP00000140713 C2H2 ZF 995 1017
ENSDARP00000140713 C2H2 ZF 1023 1044

Links

Other C2H2 ZF,Homeodomain family TFs
Other Danio rerio TFs

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14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action