zeb1a (Gasterosteus aculeatus)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSGACG00000017648 T075859_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.790 0.790
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.790 0.790
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.790 0.790
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.790 0.790
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.790 0.790
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.790 0.790
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.790 0.790
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.790 0.790
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.790 0.790
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.790 0.790
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.790 0.790
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.785 0.785
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.785 0.785
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000023321 C2H2 ZF 125 148
ENSGACP00000023321 C2H2 ZF 155 177
ENSGACP00000023321 C2H2 ZF 202 224
ENSGACP00000023321 C2H2 ZF 230 251
ENSGACP00000023321 Homeodomain 530 575
ENSGACP00000023321 C2H2 ZF 810 832
ENSGACP00000023321 C2H2 ZF 838 860
ENSGACP00000023321 C2H2 ZF 866 887

Links

Other C2H2 ZF,Homeodomain family TFs
Other Gasterosteus aculeatus TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.926
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.926
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.892
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.892
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.892
zeb1b Danio rerio ENSDARG00000013207 I 0.810
ZEB1 Takifugu rubripes ENSTRUG00000001256 N 0.810
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.803
zeb1b Oryzias latipes ENSORLG00000004296 I 0.801
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.791
ZEB1 Sorex araneus ENSSARG00000010985 I 0.790
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.790
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.790
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.788
Zeb1 Mus musculus ENSMUSG00000024238 D 0.785
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.784
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.783
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.779
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.779
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.779
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.779
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.779
ZEB1 Homo sapiens ENSG00000148516 D 0.779
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.779
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.779
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.779
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.779
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.779
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.779
ZEB1 Bos taurus ENSBTAG00000020053 I 0.779
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.779
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.779
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.779
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.779
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.779
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.779
ZEB1 Felis catus ENSFCAG00000010440 I 0.779
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.779
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.779
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.779
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.779
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.778
ABC48601 Xenopus laevis ABC48601 I 0.777
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.775
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.774
Tal_R009077 Tyto alba Tal_R009077 I 0.774
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.774
Aan_R013683 Calypte anna Aan_R013683 I 0.774
ZEB1 Gallus gallus ENSGALG00000007260 I 0.774
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.774
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.774
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.774
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.774
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.773
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.772
zeb1.S Xenopus laevis XB-GENE-865109 I 0.771
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.761
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.761
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.746
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.746
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.746
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.746
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.746
XP_002936766 Xenopus tropicalis XP_002936766 I 0.746
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.746
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.746
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.746
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.746
XP_002936763 Xenopus tropicalis XP_002936763 I 0.746
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.746
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.746
ZEB2 Felis catus ENSFCAG00000015532 I 0.746
ZEB2 Equus caballus ENSECAG00000019355 I 0.746
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.746
ZEB2 Homo sapiens ENSG00000169554 D 0.746
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.746
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.746
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.746
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.746
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.746
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.746
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.746
ZEB2 Bos taurus ENSBTAG00000012615 I 0.746
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.746
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.746
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.746
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.746
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.746
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.746
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.746
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.746
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.746
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.746
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.746
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.746
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.746
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.746
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.746
Zeb2 Mus musculus ENSMUSG00000026872 I 0.746
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.743
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.741
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.741
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.741
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.741
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.727
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.727
zeb2.S Xenopus laevis XB-GENE-865280 I 0.724
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.724
Aan_R003058 Calypte anna Aan_R003058 I 0.724
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.724
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.724
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.724
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.724
zeb1a Danio rerio ENSDARG00000016788 I 0.710
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.705