CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000015046
(
Latimeria chalumnae
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSLACG00000015046
T075876_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.982
0.982
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000017074
C2H2 ZF
666
689
LKCPKCNWHYKYQQTLEAHMKEKH
ENSLACP00000017074
C2H2 ZF
721
745
FRCEVCNYSTTTKGNLSIHMQSDKH
ENSLACP00000017074
C2H2 ZF
799
823
WRCEVCDYETNVARNLRIHMTSEKH
ENSLACP00000017074
C2H2 ZF
1085
1109
YHCSLCSYSTKAKLNLIQHVRSMKH
ENSLACP00000017074
C2H2 ZF
1362
1387
FLCWKKGCNQVFKTSAALQAHFNEIH
ENSLACP00000017074
C2H2 ZF
1403
1425
YRCNQCSLAFKTIEKLQLHSQYH
ENSLACP00000017074
C2H2 ZF
1431
1454
TMCCLCQRSFRTFQALKKHLETSH
ENSLACP00000017074
C2H2 ZF
1547
1571
YKCTVCKESFTQKNILLVHYNSVSH
ENSLACP00000017074
C2H2 ZF
1598
1622
FKCNTCNVAYSQSSTLEIHMRSVLH
ENSLACP00000017074
Homeodomain
2156
2212
KRPRTRITDDQLKVLRQYFDINNSPNEDQIKEMADKSGLPQKVIKHWFRNTLFKERQ
ENSLACP00000017074
Homeodomain
2253
2309
RSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK
ENSLACP00000017074
C2H2 ZF
2338
2359
YQCKKCSLIFQRIFDLIKHQKK
ENSLACP00000017074
C2H2 ZF
2534
2556
YQCDQCKLTFPSFEHWQEHQQLH
ENSLACP00000017074
Homeodomain
2646
2702
KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK
ENSLACP00000017074
C2H2 ZF
2716
2738
RCPFCRALFKAKTALEAHIRSRH
ENSLACP00000017074
Homeodomain
2948
3004
KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Latimeria chalumnae
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy