CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zeb1
(
Mus musculus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSMUSG00000024238
T075918_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
(Direct)
(Direct)
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.986
0.986
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.986
0.986
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.986
0.986
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.986
0.986
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.986
0.986
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.986
0.986
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.986
0.986
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.986
0.986
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.986
0.986
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.986
0.986
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.986
0.986
ZEB2
M10096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.832
0.832
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000025081
C2H2 ZF
150
173
LTCPYCDRGYKRFTSLKEHIKYRH
ENSMUSP00000025081
C2H2 ZF
180
202
FSCSLCSYTFAYRTQLERHMTSH
ENSMUSP00000025081
C2H2 ZF
220
242
FKCTECGKAFKYKHHLKEHLRIH
ENSMUSP00000025081
C2H2 ZF
248
269
YECPNCKKRFSHSGSYSSHISS
ENSMUSP00000025081
Homeodomain
564
612
QPPLKNLLSLLKAYYALNAQPSTEELSKIADSVNLPLDGVKKWFEKMQA
ENSMUSP00000025081
C2H2 ZF
882
904
YACDLCDKIFQKSSSLLRHKYEH
ENSMUSP00000025081
C2H2 ZF
910
932
HECGICRKAFKHKHHLIEHMRLH
ENSMUSP00000025081
C2H2 ZF
938
959
YQCDKCGKRFSHSGSYSQHMNH
ENSMUSP00000124395
C2H2 ZF
96
119
LTCPYCDRGYKRFTSLKEHIKYRH
ENSMUSP00000124395
C2H2 ZF
126
148
FSCSLCSYTFAYRTQLERHMTSH
ENSMUSP00000124395
C2H2 ZF
166
188
FKCTECGKAFKYKHHLKEHLRIH
ENSMUSP00000124395
C2H2 ZF
194
215
YECPNCKKRFSHSGSYSSHISS
ENSMUSP00000124815
C2H2 ZF
133
154
LTCPYCDRGYKRFTSLKEHIKY
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Mus musculus
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy