CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSONIG00000015066
(
Oreochromis niloticus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSONIG00000015066
T075948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.828
0.828
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.828
0.828
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.828
0.828
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.828
0.828
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.828
0.828
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.828
0.828
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.828
0.828
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.828
0.828
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.828
0.828
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.828
0.828
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.828
0.828
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.819
0.819
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.819
0.819
ZEB2
M10096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.770
0.770
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000018963
C2H2 ZF
142
165
HTCPYCSRGYKRNASLKEHIKYRH
ENSONIP00000018963
C2H2 ZF
172
194
YSCSHCSYTFTYRSQLERHMSHH
ENSONIP00000018963
C2H2 ZF
219
241
FKCTECSKAFKYKHHLKEHLRIH
ENSONIP00000018963
C2H2 ZF
247
268
YECSNCKKRFSHSGSYSSHISS
ENSONIP00000018963
Homeodomain
596
640
PPVDDLLSLLKTYFASNANPSDEELSKMSESVSIPVDVVRKWFIK
ENSONIP00000018963
C2H2 ZF
877
899
YPCDLCSKVFQKGSSLLRHKYEH
ENSONIP00000018963
C2H2 ZF
905
927
HECNVCKKAFKHKHHLIEHSRLH
ENSONIP00000018963
C2H2 ZF
933
954
YQCDKCGKRFSHSGSYSQHMNH
ENSONIP00000018964
C2H2 ZF
168
191
HTCPYCSRGYKRNASLKEHIKYRH
ENSONIP00000018964
C2H2 ZF
198
220
YSCSHCSYTFTYRSQLERHMSHH
ENSONIP00000018964
C2H2 ZF
245
267
FKCTECSKAFKYKHHLKEHLRIH
ENSONIP00000018964
C2H2 ZF
273
294
YECSNCKKRFSHSGSYSSHISS
ENSONIP00000018964
Homeodomain
569
613
PPVDDLLSLLKTYFASNANPSDEELSKMSESVSIPVDVVRKWFIK
ENSONIP00000018964
C2H2 ZF
850
872
YPCDLCSKVFQKGSSLLRHKYEH
ENSONIP00000018964
C2H2 ZF
878
900
HECNVCKKAFKHKHHLIEHSRLH
ENSONIP00000018964
C2H2 ZF
906
927
YQCDKCGKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Oreochromis niloticus
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy