CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zeb2b
(
Oryzias latipes
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSORLG00000000098
T075954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000000120
C2H2 ZF
235
258
LTCPYCDRGYKRLTSLKEHIKYRH
ENSORLP00000000120
C2H2 ZF
265
287
FACPLCNYTFAYRTQLERHMATH
ENSORLP00000000120
C2H2 ZF
306
328
FKCAECGKAFKYKHHLKEHLRIH
ENSORLP00000000120
C2H2 ZF
334
355
YECPNCKKRFSHSGSYSSHISS
ENSORLP00000000120
C2H2 ZF
607
628
YACQYCKETFPGPIPLHQHERY
ENSORLP00000000120
Homeodomain
675
725
LNPYRDHMSVLKAYFAMNMEPNSEELLKISIAVGLPQIFVKEWFEQRKMYE
ENSORLP00000000120
C2H2 ZF
1032
1054
YACDLCDKTFQKSSSLLRHKYEH
ENSORLP00000000120
C2H2 ZF
1060
1082
HQCQICKKAFKHKHHLIEHSRLH
ENSORLP00000000120
C2H2 ZF
1088
1109
YQCDKCGKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Oryzias latipes
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy