Zeb1 (Rattus norvegicus)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSRNOG00000017863 T076001_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
zinc finger and homeodomain protein that binds T3-response elements [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zeb1
M05844_2.00
Mus musculus
NYACCTGN

NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.990 0.990
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.990 0.990
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN

NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.986 0.986
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG

CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.986 0.986
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG

CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.986 0.986
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.986 0.986
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY

RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.986 0.986
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN

NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.986 0.986
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV

BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.986 0.986
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB

VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.986 0.986
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV

BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.986 0.986
ZEB1
M10094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.986 0.986
ZEB1
M10095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.986 0.986
ZEB2
M10096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.832 0.832
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000024336 C2H2 ZF 131 154
ENSRNOP00000024336 C2H2 ZF 161 183
ENSRNOP00000024336 C2H2 ZF 201 223
ENSRNOP00000024336 C2H2 ZF 229 250
ENSRNOP00000024336 Homeodomain 545 593
ENSRNOP00000024336 C2H2 ZF 861 883
ENSRNOP00000024336 C2H2 ZF 889 911
ENSRNOP00000024336 C2H2 ZF 917 938
ENSRNOP00000049343 C2H2 ZF 107 130
ENSRNOP00000049343 C2H2 ZF 137 159
ENSRNOP00000049343 C2H2 ZF 177 199
ENSRNOP00000049343 Homeodomain 464 512
ENSRNOP00000049343 C2H2 ZF 780 802
ENSRNOP00000049343 C2H2 ZF 808 830
ENSRNOP00000049343 C2H2 ZF 836 857

Links

Other C2H2 ZF,Homeodomain family TFs
Other Rattus norvegicus TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Zeb1 Mus musculus ENSMUSG00000024238 D 0.990
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.986
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.986
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.986
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.986
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.986
ZEB1 Felis catus ENSFCAG00000010440 I 0.986
ZEB1 Homo sapiens ENSG00000148516 D 0.986
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.986
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.986
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.986
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.986
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.986
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.986
ZEB1 Sorex araneus ENSSARG00000010985 I 0.986
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.986
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.986
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.986
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.986
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.986
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.986
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.986
ZEB1 Bos taurus ENSBTAG00000020053 I 0.986
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.986
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.986
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.986
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.986
Tal_R009077 Tyto alba Tal_R009077 I 0.981
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.981
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.981
ZEB1 Gallus gallus ENSGALG00000007260 I 0.981
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.981
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.981
Aan_R013683 Calypte anna Aan_R013683 I 0.981
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.981
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.981
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.976
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.976
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.976
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.971
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.957
ABC48601 Xenopus laevis ABC48601 I 0.956
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.952
zeb1.S Xenopus laevis XB-GENE-865109 I 0.947
zeb1b Danio rerio ENSDARG00000013207 I 0.904
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.887
zeb1b Oryzias latipes ENSORLG00000004296 I 0.879
ZEB1 Ochotona princeps ENSOPRG00000007291 I 0.874
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.870
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.864
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.861
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.861
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.837
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.832
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.832
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.832
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.832
ZEB2 Bos taurus ENSBTAG00000012615 I 0.832
XP_002936763 Xenopus tropicalis XP_002936763 I 0.832
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.832
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.832
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.832
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.832
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.832
ZEB2 Equus caballus ENSECAG00000019355 I 0.832
XP_002936766 Xenopus tropicalis XP_002936766 I 0.832
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.832
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.832
ZEB2 Felis catus ENSFCAG00000015532 I 0.832
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.832
ZEB2 Homo sapiens ENSG00000169554 D 0.832
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.832
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.832
Zeb2 Mus musculus ENSMUSG00000026872 I 0.832
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.832
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.832
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.832
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.832
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.832
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.832
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.832
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.832
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.832
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.832
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.832
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.832
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.832
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.832
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.832
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.832
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.832
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.832
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.832
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.828
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.828
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.827
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.827
Aan_R003058 Calypte anna Aan_R003058 I 0.827
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.827
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.827
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.827
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.827
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.824
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.823
zeb2.S Xenopus laevis XB-GENE-865280 I 0.822
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.819
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.817
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.817
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.817
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.813
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.812
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.801
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.793
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.779
zeb1a Danio rerio ENSDARG00000016788 I 0.778
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.774
ENSOARG00000013971 Ovis aries ENSOARG00000013971 I 0.774
ZEB1 Oryctolagus cuniculus ENSOCUG00000006516 I 0.769
ZEB1 Erinaceus europaeus ENSEEUG00000006386 I 0.764
ZEB1 Tursiops truncatus ENSTTRG00000011798 I 0.764
ZEB1 Procavia capensis ENSPCAG00000004425 I 0.764
ZEB1 Equus caballus ENSECAG00000020102 I 0.764
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.761
Pvit_04101 Pogona vitticeps Pvit_04101 I 0.755
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.736
ENSTSYG00000009177 Tarsius syrichta ENSTSYG00000009177 I 0.731
ZEB2 Procavia capensis ENSPCAG00000014674 I 0.711
ENSTSYG00000009434 Tarsius syrichta ENSTSYG00000009434 I 0.711