zeb1a (Tetraodon nigroviridis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSTNIG00000007962 T076027_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.818 0.818
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.818 0.818
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.818 0.818
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.818 0.818
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.818 0.818
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.818 0.818
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.818 0.818
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.818 0.818
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.818 0.818
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.818 0.818
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.818 0.818
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.808 0.808
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.808 0.808
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.788 0.788
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000010784 C2H2 ZF 130 153
ENSTNIP00000010784 C2H2 ZF 160 182
ENSTNIP00000010784 C2H2 ZF 203 225
ENSTNIP00000010784 C2H2 ZF 231 252
ENSTNIP00000010784 Homeodomain 528 571
ENSTNIP00000010784 C2H2 ZF 786 808
ENSTNIP00000010784 C2H2 ZF 814 836
ENSTNIP00000010784 C2H2 ZF 842 863

Links

Other C2H2 ZF,Homeodomain family TFs
Other Tetraodon nigroviridis TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.951
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.926
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.926
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.926
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.922
ZEB1 Takifugu rubripes ENSTRUG00000001256 N 0.887
zeb1b Danio rerio ENSDARG00000013207 I 0.842
zeb1b Oryzias latipes ENSORLG00000004296 I 0.828
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.823
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.823
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.823
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.818
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.818
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.818
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.818
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.818
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.818
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.818
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.818
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.818
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.818
ZEB1 Sorex araneus ENSSARG00000010985 I 0.818
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.818
ZEB1 Felis catus ENSFCAG00000010440 I 0.818
ZEB1 Homo sapiens ENSG00000148516 D 0.818
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.818
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.818
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.818
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.818
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.818
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.818
ZEB1 Bos taurus ENSBTAG00000020053 I 0.818
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.818
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.818
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.818
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.818
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.818
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.818
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.813
Tal_R009077 Tyto alba Tal_R009077 I 0.813
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.813
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.813
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.813
ZEB1 Gallus gallus ENSGALG00000007260 I 0.813
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.813
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.813
Aan_R013683 Calypte anna Aan_R013683 I 0.813
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.808
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.808
Zeb1 Mus musculus ENSMUSG00000024238 D 0.808
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.808
ABC48601 Xenopus laevis ABC48601 I 0.803
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.798
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.797
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.793
zeb1.S Xenopus laevis XB-GENE-865109 I 0.793
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.788
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.788
XP_002936763 Xenopus tropicalis XP_002936763 I 0.788
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.788
XP_002936766 Xenopus tropicalis XP_002936766 I 0.788
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.788
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.788
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.788
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.788
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.788
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.788
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.788
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.788
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.788
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.788
ZEB2 Equus caballus ENSECAG00000019355 I 0.788
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.788
ZEB2 Felis catus ENSFCAG00000015532 I 0.788
ZEB2 Homo sapiens ENSG00000169554 D 0.788
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.788
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.788
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.788
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.788
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.788
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.788
ZEB2 Bos taurus ENSBTAG00000012615 I 0.788
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.788
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.788
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.788
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.788
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.788
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.788
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.788
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.788
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.788
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.788
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.788
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.788
Zeb2 Mus musculus ENSMUSG00000026872 I 0.788
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.788
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.788
zeb2.S Xenopus laevis XB-GENE-865280 I 0.783
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.783
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.783
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.783
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.783
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.783
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.783
Aan_R003058 Calypte anna Aan_R003058 I 0.783
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.783
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.783
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.778
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.778
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.778
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.778
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.773
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.773
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.767
zeb1a Danio rerio ENSDARG00000016788 I 0.754
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.709