CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zeb2b
(
Tetraodon nigroviridis
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSTNIG00000017169
T076029_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000020306
C2H2 ZF
207
230
LTCPYCDRGYKRLTSLKEHIKYRH
ENSTNIP00000020306
C2H2 ZF
237
259
FACPLCSYTFAYRTQLERHMATH
ENSTNIP00000020306
C2H2 ZF
278
300
FKCTECGKAFKYKHHLKEHLRIH
ENSTNIP00000020306
C2H2 ZF
306
327
YECSNCKKRFSHSGSYSSHISS
ENSTNIP00000020306
C2H2 ZF
579
600
YACQYCKETFPGPIPLHQHERY
ENSTNIP00000020306
Homeodomain
647
697
LNPYRDHMSVLKAYFAMNMEPNSEELLKISIAVGLPQEFVKEWFDQRKMYQ
ENSTNIP00000020306
C2H2 ZF
1011
1033
YACDLCDKTFQKSSSLLRHKYEH
ENSTNIP00000020306
C2H2 ZF
1039
1061
HQCQICKKAFKHKHHLIEHSRLH
ENSTNIP00000020306
C2H2 ZF
1067
1088
YQCDKCGKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Tetraodon nigroviridis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
zeb2b
Takifugu rubripes
ENSTRUG00000005095
N
0.996
ENSPFOG00000004757
Poecilia formosa
ENSPFOG00000004757
N
0.983
ENSXMAG00000010581
Xiphophorus maculatus
ENSXMAG00000010581
N
0.978
ENSONIG00000012271
Oreochromis niloticus
ENSONIG00000012271
N
0.978
zeb2b
Oryzias latipes
ENSORLG00000000098
N
0.974
ENSGMOG00000014388
Gadus morhua
ENSGMOG00000014388
N
0.970
zeb2b
Gasterosteus aculeatus
ENSGACG00000015660
N
0.966
ENSLOCG00000001301
Lepisosteus oculatus
ENSLOCG00000001301
N
0.961
zeb2b
Danio rerio
ENSDARG00000078416
N
0.957
ENSLACG00000009946
Latimeria chalumnae
ENSLACG00000009946
N
0.957
ENSAMXG00000012825
Astyanax mexicanus
ENSAMXG00000012825
N
0.901
ENSONIG00000005810
Oreochromis niloticus
ENSONIG00000005810
N
0.890
ENSAMXG00000008022
Astyanax mexicanus
ENSAMXG00000008022
N
0.724