zeb1b (Takifugu rubripes)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSTRUG00000001422 T076032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.820 0.820
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.820 0.820
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.820 0.820
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.820 0.820
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.820 0.820
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.820 0.820
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.820 0.820
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.820 0.820
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.820 0.820
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.820 0.820
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.820 0.820
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.816 0.816
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.816 0.816
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000003271 C2H2 ZF 59 82
ENSTRUP00000003271 C2H2 ZF 89 111
ENSTRUP00000003271 C2H2 ZF 129 151
ENSTRUP00000003271 C2H2 ZF 157 178
ENSTRUP00000003271 Homeodomain 467 514
ENSTRUP00000003271 C2H2 ZF 754 776
ENSTRUP00000003271 C2H2 ZF 782 804
ENSTRUP00000003271 C2H2 ZF 810 831
ENSTRUP00000003272 C2H2 ZF 65 88
ENSTRUP00000003272 C2H2 ZF 95 117
ENSTRUP00000003272 C2H2 ZF 135 157
ENSTRUP00000003272 C2H2 ZF 163 184
ENSTRUP00000003272 Homeodomain 473 520
ENSTRUP00000003272 C2H2 ZF 760 782
ENSTRUP00000003272 C2H2 ZF 788 810
ENSTRUP00000003272 C2H2 ZF 816 837
ENSTRUP00000003273 C2H2 ZF 65 88
ENSTRUP00000003273 C2H2 ZF 95 117
ENSTRUP00000003273 C2H2 ZF 135 157
ENSTRUP00000003273 C2H2 ZF 163 184
ENSTRUP00000003273 Homeodomain 473 520
ENSTRUP00000003273 C2H2 ZF 760 782
ENSTRUP00000003273 C2H2 ZF 788 810
ENSTRUP00000003273 C2H2 ZF 816 837

Links

Other C2H2 ZF,Homeodomain family TFs
Other Takifugu rubripes TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.887
zeb1b Oryzias latipes ENSORLG00000004296 I 0.879
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.865
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.859
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.856
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.826
zeb1b Danio rerio ENSDARG00000013207 I 0.825
Zeb1 Mus musculus ENSMUSG00000024238 D 0.816
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.816
ABC48601 Xenopus laevis ABC48601 I 0.816
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.812
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.812
ZEB1 Homo sapiens ENSG00000148516 D 0.812
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.812
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.812
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.812
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.812
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.812
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.812
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.812
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.812
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.812
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.812
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.812
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.812
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.812
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.812
ZEB1 Felis catus ENSFCAG00000010440 I 0.812
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.812
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.812
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.812
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.812
ZEB1 Bos taurus ENSBTAG00000020053 I 0.812
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.812
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.812
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.812
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.812
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.811
ZEB1 Sorex araneus ENSSARG00000010985 I 0.809
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.809
Tal_R009077 Tyto alba Tal_R009077 I 0.808
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.808
Aan_R013683 Calypte anna Aan_R013683 I 0.808
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.808
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.808
ZEB1 Gallus gallus ENSGALG00000007260 I 0.808
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.808
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.807
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.804
zeb1.S Xenopus laevis XB-GENE-865109 I 0.801
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.798
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.796
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.778
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.775
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.765
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.765
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.765
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.762
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.762
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.762
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.762
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.762
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.762
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.762
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.762
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.762
ZEB2 Equus caballus ENSECAG00000019355 I 0.762
Aan_R003058 Calypte anna Aan_R003058 I 0.762
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.762
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.762
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.762
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.762
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.762
XP_002936763 Xenopus tropicalis XP_002936763 I 0.762
XP_002936766 Xenopus tropicalis XP_002936766 I 0.762
ZEB2 Bos taurus ENSBTAG00000012615 I 0.762
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.762
ZEB2 Felis catus ENSFCAG00000015532 I 0.762
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.762
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.762
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.762
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.762
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.762
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.762
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.762
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.762
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.762
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.762
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.762
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.762
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.762
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.762
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.762
Zeb2 Mus musculus ENSMUSG00000026872 I 0.762
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.762
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.762
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.762
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.762
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.762
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.762
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.762
ZEB2 Homo sapiens ENSG00000169554 D 0.762
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.762
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.761
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.761
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.761
zeb2.S Xenopus laevis XB-GENE-865280 I 0.757
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.755
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.752
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.752
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.752
zeb1a Danio rerio ENSDARG00000016788 I 0.744
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.730
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.728
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.721